Protein–RNA interactions for Protein: P01848

TRAC, T-cell receptor alpha chain C region, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRACP01848 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRACP01848 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRACP01848 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC13.69□□□□□ -0.22
TRACP01848 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRACP01848 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRACP01848 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC13.69□□□□□ -0.22
TRACP01848 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRACP01848 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TRACP01848 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TRACP01848 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRACP01848 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
TRACP01848 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRACP01848 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRACP01848 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
TRACP01848 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC13.69□□□□□ -0.22
TRACP01848 AC044849.2-201ENST00000606596 710 ntBASIC13.69□□□□□ -0.22
TRACP01848 AC073314.1-201ENST00000568729 2216 ntBASIC13.69□□□□□ -0.22
TRACP01848 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRACP01848 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRACP01848 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.69□□□□□ -0.22
TRACP01848 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC13.69□□□□□ -0.22
TRACP01848 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRACP01848 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRACP01848 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRACP01848 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.69□□□□□ -0.22
TRACP01848 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRACP01848 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRACP01848 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC13.68□□□□□ -0.22
TRACP01848 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRACP01848 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
TRACP01848 AL049796.1-201ENST00000565336 1766 ntBASIC13.68□□□□□ -0.22
TRACP01848 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC13.68□□□□□ -0.22
TRACP01848 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TRACP01848 SMPD5-203ENST00000639008 1464 ntBASIC13.68□□□□□ -0.22
TRACP01848 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC13.68□□□□□ -0.22
TRACP01848 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRACP01848 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC13.68□□□□□ -0.22
TRACP01848 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRACP01848 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRACP01848 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRACP01848 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRACP01848 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRACP01848 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRACP01848 BOD1-206ENST00000480951 814 ntTSL 2 BASIC13.68□□□□□ -0.22
TRACP01848 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC13.68□□□□□ -0.22
TRACP01848 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRACP01848 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRACP01848 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRACP01848 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRACP01848 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRACP01848 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRACP01848 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRACP01848 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
TRACP01848 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRACP01848 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRACP01848 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TRACP01848 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRACP01848 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC13.67□□□□□ -0.22
TRACP01848 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 PCDHAC2-203ENST00000615316 3011 ntBASIC13.67□□□□□ -0.22
TRACP01848 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC13.67□□□□□ -0.22
TRACP01848 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
TRACP01848 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 AC098818.2-201ENST00000564925 2320 ntBASIC13.67□□□□□ -0.22
TRACP01848 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC13.67□□□□□ -0.22
TRACP01848 AL157400.5-201ENST00000507624 621 ntBASIC13.67□□□□□ -0.22
TRACP01848 AP006261.1-201ENST00000584783 668 ntBASIC13.67□□□□□ -0.22
TRACP01848 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRACP01848 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
TRACP01848 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRACP01848 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRACP01848 MFF-203ENST00000349901 1716 ntTSL 2 BASIC13.67□□□□□ -0.22
TRACP01848 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRACP01848 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRACP01848 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRACP01848 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC13.66□□□□□ -0.22
TRACP01848 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRACP01848 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.66□□□□□ -0.22
TRACP01848 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRACP01848 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRACP01848 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms