Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.24■□□□□ 0.51
NGFP01138 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.24■□□□□ 0.51
NGFP01138 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NGFP01138 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NGFP01138 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.23■□□□□ 0.51
NGFP01138 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.23■□□□□ 0.51
NGFP01138 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.23■□□□□ 0.51
NGFP01138 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.23■□□□□ 0.51
NGFP01138 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.23■□□□□ 0.51
NGFP01138 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NGFP01138 KRT18P61-201ENST00000585825 1298 ntBASIC18.23■□□□□ 0.51
NGFP01138 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.23■□□□□ 0.51
NGFP01138 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NGFP01138 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NGFP01138 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
NGFP01138 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.23■□□□□ 0.51
NGFP01138 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NGFP01138 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NGFP01138 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NGFP01138 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.22■□□□□ 0.51
NGFP01138 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NGFP01138 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NGFP01138 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.22■□□□□ 0.51
NGFP01138 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.22■□□□□ 0.51
NGFP01138 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.22■□□□□ 0.51
NGFP01138 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NGFP01138 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NGFP01138 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.22■□□□□ 0.51
NGFP01138 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NGFP01138 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.22■□□□□ 0.51
NGFP01138 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.22■□□□□ 0.51
NGFP01138 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.22■□□□□ 0.51
NGFP01138 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NGFP01138 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.22■□□□□ 0.51
NGFP01138 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.22■□□□□ 0.51
NGFP01138 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.22■□□□□ 0.51
NGFP01138 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.22■□□□□ 0.51
NGFP01138 AC104187.1-201ENST00000607510 612 ntBASIC18.22■□□□□ 0.51
NGFP01138 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.22■□□□□ 0.51
NGFP01138 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NGFP01138 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NGFP01138 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NGFP01138 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NGFP01138 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NGFP01138 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.22■□□□□ 0.51
NGFP01138 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NGFP01138 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
NGFP01138 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
NGFP01138 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
NGFP01138 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NGFP01138 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NGFP01138 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.21■□□□□ 0.51
NGFP01138 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NGFP01138 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.21■□□□□ 0.51
NGFP01138 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.21■□□□□ 0.51
NGFP01138 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NGFP01138 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.21■□□□□ 0.51
NGFP01138 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.21■□□□□ 0.51
NGFP01138 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.21■□□□□ 0.51
NGFP01138 NTF6G-201ENST00000591094 616 ntBASIC18.21■□□□□ 0.51
NGFP01138 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NGFP01138 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
NGFP01138 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NGFP01138 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NGFP01138 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NGFP01138 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NGFP01138 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NGFP01138 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.21■□□□□ 0.51
NGFP01138 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NGFP01138 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NGFP01138 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.2■□□□□ 0.5
NGFP01138 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NGFP01138 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NGFP01138 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.2■□□□□ 0.5
NGFP01138 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NGFP01138 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NGFP01138 CLDN5-201ENST00000403084 2357 ntBASIC18.19■□□□□ 0.5
NGFP01138 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NGFP01138 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NGFP01138 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.19■□□□□ 0.5
NGFP01138 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NGFP01138 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.19■□□□□ 0.5
NGFP01138 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.19■□□□□ 0.5
NGFP01138 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.19■□□□□ 0.5
NGFP01138 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.19■□□□□ 0.5
NGFP01138 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NGFP01138 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.19■□□□□ 0.5
NGFP01138 MIR5787-201ENST00000611784 55 ntBASIC18.19■□□□□ 0.5
NGFP01138 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NGFP01138 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.19■□□□□ 0.5
NGFP01138 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.19■□□□□ 0.5
NGFP01138 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.18■□□□□ 0.5
NGFP01138 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NGFP01138 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
NGFP01138 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NGFP01138 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NGFP01138 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NGFP01138 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NGFP01138 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.18■□□□□ 0.5
NGFP01138 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms