Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 KRT16P3-201ENST00000439127 1283 ntBASIC19.75■□□□□ 0.75
CLPTM1O96005 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.75■□□□□ 0.75
CLPTM1O96005 MTDHP2-201ENST00000601468 714 ntBASIC19.75■□□□□ 0.75
CLPTM1O96005 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CLPTM1O96005 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLPTM1O96005 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLPTM1O96005 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLPTM1O96005 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLPTM1O96005 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLPTM1O96005 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLPTM1O96005 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLPTM1O96005 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CLPTM1O96005 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLPTM1O96005 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLPTM1O96005 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLPTM1O96005 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLPTM1O96005 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLPTM1O96005 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.74■□□□□ 0.75
CLPTM1O96005 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CLPTM1O96005 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLPTM1O96005 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.74■□□□□ 0.75
CLPTM1O96005 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.74■□□□□ 0.75
CLPTM1O96005 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.74■□□□□ 0.75
CLPTM1O96005 AC010997.5-201ENST00000609182 354 ntBASIC19.74■□□□□ 0.75
CLPTM1O96005 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLPTM1O96005 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLPTM1O96005 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLPTM1O96005 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLPTM1O96005 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CLPTM1O96005 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1O96005 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1O96005 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1O96005 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1O96005 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1O96005 OXCT2P1-201ENST00000447263 1535 ntBASIC19.73■□□□□ 0.75
CLPTM1O96005 AC018445.3-201ENST00000624177 1945 ntBASIC19.73■□□□□ 0.75
CLPTM1O96005 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1O96005 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1O96005 AC004448.1-201ENST00000458332 883 ntBASIC19.73■□□□□ 0.75
CLPTM1O96005 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CLPTM1O96005 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.73■□□□□ 0.75
CLPTM1O96005 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.73■□□□□ 0.75
CLPTM1O96005 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.73■□□□□ 0.75
CLPTM1O96005 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1O96005 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLPTM1O96005 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CLPTM1O96005 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
CLPTM1O96005 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLPTM1O96005 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CLPTM1O96005 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLPTM1O96005 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.72■□□□□ 0.75
CLPTM1O96005 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.72■□□□□ 0.75
CLPTM1O96005 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLPTM1O96005 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CLPTM1O96005 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.72■□□□□ 0.75
CLPTM1O96005 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CLPTM1O96005 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLPTM1O96005 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.71■□□□□ 0.75
CLPTM1O96005 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.71■□□□□ 0.75
CLPTM1O96005 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CLPTM1O96005 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLPTM1O96005 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CLPTM1O96005 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CLPTM1O96005 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.71■□□□□ 0.75
CLPTM1O96005 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.71■□□□□ 0.75
CLPTM1O96005 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLPTM1O96005 SMG8-203ENST00000578922 2178 ntBASIC19.71■□□□□ 0.75
CLPTM1O96005 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLPTM1O96005 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.71■□□□□ 0.75
CLPTM1O96005 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLPTM1O96005 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLPTM1O96005 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.7■□□□□ 0.74
CLPTM1O96005 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.7■□□□□ 0.74
CLPTM1O96005 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CLPTM1O96005 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1O96005 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1O96005 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.7■□□□□ 0.74
CLPTM1O96005 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1O96005 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.7■□□□□ 0.74
CLPTM1O96005 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1O96005 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1O96005 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLPTM1O96005 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1O96005 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.7■□□□□ 0.74
CLPTM1O96005 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1O96005 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1O96005 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.7■□□□□ 0.74
CLPTM1O96005 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1O96005 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CLPTM1O96005 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPTM1O96005 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.7■□□□□ 0.74
CLPTM1O96005 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPTM1O96005 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CLPTM1O96005 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPTM1O96005 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPTM1O96005 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLPTM1O96005 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPTM1O96005 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.69■□□□□ 0.74
CLPTM1O96005 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CLPTM1O96005 AC131212.1-201ENST00000613771 668 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms