Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.64■□□□□ 0.57
CNOT4O95628 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.64■□□□□ 0.57
CNOT4O95628 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT4O95628 AC120498.10-201ENST00000621827 505 ntBASIC18.64■□□□□ 0.57
CNOT4O95628 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT4O95628 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT4O95628 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT4O95628 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.64■□□□□ 0.57
CNOT4O95628 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT4O95628 FAM99A-202ENST00000538190 1989 ntBASIC18.64■□□□□ 0.57
CNOT4O95628 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT4O95628 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT4O95628 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT4O95628 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT4O95628 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT4O95628 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CNOT4O95628 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT4O95628 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT4O95628 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.63■□□□□ 0.57
CNOT4O95628 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.63■□□□□ 0.57
CNOT4O95628 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.63■□□□□ 0.57
CNOT4O95628 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.63■□□□□ 0.57
CNOT4O95628 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT4O95628 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.63■□□□□ 0.57
CNOT4O95628 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT4O95628 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT4O95628 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT4O95628 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT4O95628 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CNOT4O95628 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT4O95628 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT4O95628 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT4O95628 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT4O95628 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT4O95628 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT4O95628 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CNOT4O95628 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.62■□□□□ 0.57
CNOT4O95628 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.62■□□□□ 0.57
CNOT4O95628 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT4O95628 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT4O95628 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.62■□□□□ 0.57
CNOT4O95628 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.62■□□□□ 0.57
CNOT4O95628 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.62■□□□□ 0.57
CNOT4O95628 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT4O95628 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT4O95628 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CNOT4O95628 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.62■□□□□ 0.57
CNOT4O95628 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.62■□□□□ 0.57
CNOT4O95628 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT4O95628 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT4O95628 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT4O95628 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT4O95628 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT4O95628 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CNOT4O95628 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT4O95628 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CNOT4O95628 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT4O95628 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CNOT4O95628 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT4O95628 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT4O95628 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT4O95628 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.61■□□□□ 0.57
CNOT4O95628 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.61■□□□□ 0.57
CNOT4O95628 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.61■□□□□ 0.57
CNOT4O95628 AC073111.5-205ENST00000641717 521 ntBASIC18.61■□□□□ 0.57
CNOT4O95628 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT4O95628 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT4O95628 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT4O95628 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CNOT4O95628 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT4O95628 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
CNOT4O95628 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.61■□□□□ 0.57
CNOT4O95628 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT4O95628 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNOT4O95628 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.6■□□□□ 0.57
CNOT4O95628 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.6■□□□□ 0.57
CNOT4O95628 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT4O95628 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT4O95628 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT4O95628 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT4O95628 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.6■□□□□ 0.57
CNOT4O95628 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT4O95628 CDCA4P2-201ENST00000441182 718 ntBASIC18.6■□□□□ 0.57
CNOT4O95628 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT4O95628 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CNOT4O95628 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.6■□□□□ 0.57
CNOT4O95628 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.6■□□□□ 0.57
CNOT4O95628 MYCNOS-205ENST00000641950 531 ntBASIC18.6■□□□□ 0.57
CNOT4O95628 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT4O95628 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.6■□□□□ 0.57
CNOT4O95628 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT4O95628 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.59■□□□□ 0.57
CNOT4O95628 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT4O95628 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT4O95628 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT4O95628 KRT16P2-201ENST00000414673 1423 ntBASIC18.59■□□□□ 0.57
CNOT4O95628 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT4O95628 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT4O95628 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT4O95628 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms