Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
LTN1O94822 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC28.17■■■□□ 2.1
LTN1O94822 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
LTN1O94822 AC142381.4-202ENST00000563973 229 ntBASIC28.17■■■□□ 2.1
LTN1O94822 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
LTN1O94822 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
LTN1O94822 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
LTN1O94822 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
LTN1O94822 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
LTN1O94822 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC28.17■■■□□ 2.1
LTN1O94822 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
LTN1O94822 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC28.16■■■□□ 2.1
LTN1O94822 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
LTN1O94822 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC28.16■■■□□ 2.1
LTN1O94822 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
LTN1O94822 CYP2T3P-201ENST00000601990 817 ntBASIC28.16■■■□□ 2.1
LTN1O94822 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC28.16■■■□□ 2.1
LTN1O94822 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
LTN1O94822 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
LTN1O94822 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC28.16■■■□□ 2.1
LTN1O94822 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
LTN1O94822 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
LTN1O94822 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC28.16■■■□□ 2.1
LTN1O94822 FAM21FP-204ENST00000608637 956 ntBASIC28.16■■■□□ 2.1
LTN1O94822 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
LTN1O94822 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
LTN1O94822 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC28.16■■■□□ 2.1
LTN1O94822 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
LTN1O94822 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
LTN1O94822 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
LTN1O94822 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC28.15■■■□□ 2.1
LTN1O94822 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
LTN1O94822 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
LTN1O94822 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC28.15■■■□□ 2.1
LTN1O94822 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC28.15■■■□□ 2.1
LTN1O94822 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
LTN1O94822 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
LTN1O94822 ESRRAP1-201ENST00000400596 1257 ntBASIC28.15■■■□□ 2.1
LTN1O94822 AC026366.1-201ENST00000488803 879 ntBASIC28.15■■■□□ 2.1
LTN1O94822 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
LTN1O94822 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC28.15■■■□□ 2.1
LTN1O94822 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
LTN1O94822 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
LTN1O94822 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC28.14■■■□□ 2.1
LTN1O94822 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
LTN1O94822 MMD2-204ENST00000612910 778 ntTSL 5 BASIC28.14■■■□□ 2.1
LTN1O94822 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
LTN1O94822 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC28.14■■■□□ 2.1
LTN1O94822 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.09
LTN1O94822 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
LTN1O94822 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
LTN1O94822 MMAB-206ENST00000540016 945 ntTSL 3 BASIC28.14■■■□□ 2.09
LTN1O94822 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC28.13■■■□□ 2.09
LTN1O94822 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC28.13■■■□□ 2.09
LTN1O94822 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC28.13■■■□□ 2.09
LTN1O94822 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
LTN1O94822 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
LTN1O94822 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC28.13■■■□□ 2.09
LTN1O94822 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC28.13■■■□□ 2.09
LTN1O94822 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC28.13■■■□□ 2.09
LTN1O94822 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
LTN1O94822 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
LTN1O94822 AC010542.4-201ENST00000563151 1910 ntBASIC28.13■■■□□ 2.09
LTN1O94822 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC28.13■■■□□ 2.09
LTN1O94822 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC28.12■■■□□ 2.09
LTN1O94822 AC007322.3-201ENST00000426526 701 ntBASIC28.12■■■□□ 2.09
LTN1O94822 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
LTN1O94822 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
LTN1O94822 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC28.12■■■□□ 2.09
LTN1O94822 AC068473.5-201ENST00000616428 2072 ntBASIC28.12■■■□□ 2.09
LTN1O94822 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
LTN1O94822 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
LTN1O94822 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
LTN1O94822 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC28.11■■■□□ 2.09
LTN1O94822 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
LTN1O94822 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
LTN1O94822 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
LTN1O94822 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC28.11■■■□□ 2.09
LTN1O94822 AC245052.3-201ENST00000450182 901 ntBASIC28.11■■■□□ 2.09
LTN1O94822 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC28.11■■■□□ 2.09
LTN1O94822 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC28.11■■■□□ 2.09
LTN1O94822 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC28.11■■■□□ 2.09
LTN1O94822 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
LTN1O94822 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
LTN1O94822 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC28.11■■■□□ 2.09
LTN1O94822 AL158047.1-201ENST00000445918 881 ntBASIC28.11■■■□□ 2.09
LTN1O94822 CASP6-205ENST00000505486 538 ntTSL 4 BASIC28.11■■■□□ 2.09
LTN1O94822 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC28.1■■■□□ 2.09
LTN1O94822 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC28.1■■■□□ 2.09
LTN1O94822 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
LTN1O94822 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
LTN1O94822 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
LTN1O94822 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
LTN1O94822 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC28.1■■■□□ 2.09
LTN1O94822 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
LTN1O94822 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC28.1■■■□□ 2.09
LTN1O94822 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
LTN1O94822 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
LTN1O94822 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
LTN1O94822 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms