Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.29■□□□□ 0.84
CNOT3O75175 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT3O75175 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT3O75175 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.29■□□□□ 0.84
CNOT3O75175 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.29■□□□□ 0.84
CNOT3O75175 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.29■□□□□ 0.84
CNOT3O75175 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
CNOT3O75175 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT3O75175 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT3O75175 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT3O75175 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CNOT3O75175 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT3O75175 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT3O75175 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT3O75175 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT3O75175 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT3O75175 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT3O75175 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT3O75175 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.28■□□□□ 0.84
CNOT3O75175 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.28■□□□□ 0.84
CNOT3O75175 AC137761.2-201ENST00000561729 223 ntBASIC20.28■□□□□ 0.84
CNOT3O75175 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.28■□□□□ 0.84
CNOT3O75175 AC145350.3-201ENST00000569033 163 ntBASIC20.28■□□□□ 0.84
CNOT3O75175 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT3O75175 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT3O75175 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.28■□□□□ 0.84
CNOT3O75175 AC087742.1-201ENST00000575880 1738 ntBASIC20.27■□□□□ 0.84
CNOT3O75175 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT3O75175 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT3O75175 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT3O75175 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT3O75175 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT3O75175 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT3O75175 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.27■□□□□ 0.84
CNOT3O75175 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.27■□□□□ 0.84
CNOT3O75175 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
CNOT3O75175 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CNOT3O75175 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
CNOT3O75175 AC009237.3-201ENST00000393279 1427 ntBASIC20.27■□□□□ 0.83
CNOT3O75175 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CNOT3O75175 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.27■□□□□ 0.83
CNOT3O75175 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.26■□□□□ 0.83
CNOT3O75175 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.26■□□□□ 0.83
CNOT3O75175 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT3O75175 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT3O75175 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT3O75175 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CNOT3O75175 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.26■□□□□ 0.83
CNOT3O75175 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT3O75175 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CNOT3O75175 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CNOT3O75175 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT3O75175 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT3O75175 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT3O75175 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT3O75175 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT3O75175 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.26■□□□□ 0.83
CNOT3O75175 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CNOT3O75175 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT3O75175 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT3O75175 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT3O75175 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT3O75175 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
CNOT3O75175 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.25■□□□□ 0.83
CNOT3O75175 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CNOT3O75175 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CNOT3O75175 AC055733.4-201ENST00000638462 1354 ntBASIC20.25■□□□□ 0.83
CNOT3O75175 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT3O75175 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CNOT3O75175 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CNOT3O75175 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.25■□□□□ 0.83
CNOT3O75175 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT3O75175 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.25■□□□□ 0.83
CNOT3O75175 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT3O75175 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT3O75175 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT3O75175 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.25■□□□□ 0.83
CNOT3O75175 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT3O75175 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT3O75175 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.24■□□□□ 0.83
CNOT3O75175 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.24■□□□□ 0.83
CNOT3O75175 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CNOT3O75175 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CNOT3O75175 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT3O75175 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.24■□□□□ 0.83
CNOT3O75175 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.24■□□□□ 0.83
CNOT3O75175 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT3O75175 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT3O75175 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT3O75175 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT3O75175 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT3O75175 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.23■□□□□ 0.83
CNOT3O75175 AC092053.2-201ENST00000640557 1818 ntBASIC20.23■□□□□ 0.83
CNOT3O75175 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT3O75175 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT3O75175 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT3O75175 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT3O75175 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT3O75175 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.23■□□□□ 0.83
CNOT3O75175 KRT19P1-201ENST00000405746 1186 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms