Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PRAMEF2O60811 KRT87P-202ENST00000534226 1464 ntBASIC19.74■□□□□ 0.75
PRAMEF2O60811 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF2O60811 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PRAMEF2O60811 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF2O60811 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF2O60811 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.74■□□□□ 0.75
PRAMEF2O60811 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.74■□□□□ 0.75
PRAMEF2O60811 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF2O60811 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.74■□□□□ 0.75
PRAMEF2O60811 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.74■□□□□ 0.75
PRAMEF2O60811 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF2O60811 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PRAMEF2O60811 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF2O60811 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF2O60811 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PRAMEF2O60811 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF2O60811 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.73■□□□□ 0.75
PRAMEF2O60811 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF2O60811 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF2O60811 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF2O60811 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF2O60811 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PRAMEF2O60811 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF2O60811 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF2O60811 AC026185.1-201ENST00000445748 174 ntBASIC19.73■□□□□ 0.75
PRAMEF2O60811 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.73■□□□□ 0.75
PRAMEF2O60811 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.73■□□□□ 0.75
PRAMEF2O60811 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.73■□□□□ 0.75
PRAMEF2O60811 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.73■□□□□ 0.75
PRAMEF2O60811 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.73■□□□□ 0.75
PRAMEF2O60811 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF2O60811 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF2O60811 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF2O60811 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PRAMEF2O60811 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF2O60811 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.72■□□□□ 0.75
PRAMEF2O60811 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.72■□□□□ 0.75
PRAMEF2O60811 HLA-L-209ENST00000420110 1011 ntBASIC19.72■□□□□ 0.75
PRAMEF2O60811 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.72■□□□□ 0.75
PRAMEF2O60811 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.72■□□□□ 0.75
PRAMEF2O60811 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.72■□□□□ 0.75
PRAMEF2O60811 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF2O60811 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF2O60811 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.72■□□□□ 0.75
PRAMEF2O60811 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF2O60811 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF2O60811 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF2O60811 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEF2O60811 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEF2O60811 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEF2O60811 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEF2O60811 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEF2O60811 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.71■□□□□ 0.75
PRAMEF2O60811 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEF2O60811 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEF2O60811 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.71■□□□□ 0.75
PRAMEF2O60811 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEF2O60811 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEF2O60811 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.7■□□□□ 0.74
PRAMEF2O60811 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.7■□□□□ 0.74
PRAMEF2O60811 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PRAMEF2O60811 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF2O60811 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF2O60811 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.7■□□□□ 0.74
PRAMEF2O60811 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.7■□□□□ 0.74
PRAMEF2O60811 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.7■□□□□ 0.74
PRAMEF2O60811 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.7■□□□□ 0.74
PRAMEF2O60811 AC011767.1-201ENST00000617410 1153 ntBASIC19.7■□□□□ 0.74
PRAMEF2O60811 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF2O60811 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF2O60811 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF2O60811 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.7■□□□□ 0.74
PRAMEF2O60811 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.7■□□□□ 0.74
PRAMEF2O60811 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF2O60811 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF2O60811 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.7■□□□□ 0.74
PRAMEF2O60811 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF2O60811 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PRAMEF2O60811 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.69■□□□□ 0.74
PRAMEF2O60811 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF2O60811 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF2O60811 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF2O60811 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.69■□□□□ 0.74
PRAMEF2O60811 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.69■□□□□ 0.74
PRAMEF2O60811 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF2O60811 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF2O60811 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.69■□□□□ 0.74
PRAMEF2O60811 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF2O60811 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.69■□□□□ 0.74
PRAMEF2O60811 AC104187.1-201ENST00000607510 612 ntBASIC19.69■□□□□ 0.74
PRAMEF2O60811 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF2O60811 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF2O60811 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF2O60811 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF2O60811 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF2O60811 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF2O60811 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF2O60811 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF2O60811 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms