Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXCL13O43927 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXCL13O43927 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXCL13O43927 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXCL13O43927 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXCL13O43927 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXCL13O43927 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCL13O43927 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCL13O43927 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.85■□□□□ 0.61
CXCL13O43927 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.85■□□□□ 0.61
CXCL13O43927 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCL13O43927 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCL13O43927 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.85■□□□□ 0.61
CXCL13O43927 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
CXCL13O43927 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCL13O43927 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CXCL13O43927 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CXCL13O43927 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCL13O43927 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CXCL13O43927 AC011767.1-201ENST00000617410 1153 ntBASIC18.85■□□□□ 0.61
CXCL13O43927 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCL13O43927 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXCL13O43927 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.85■□□□□ 0.61
CXCL13O43927 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.85■□□□□ 0.61
CXCL13O43927 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL13O43927 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL13O43927 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.84■□□□□ 0.61
CXCL13O43927 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL13O43927 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL13O43927 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.84■□□□□ 0.61
CXCL13O43927 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL13O43927 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL13O43927 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL13O43927 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.84■□□□□ 0.61
CXCL13O43927 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL13O43927 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.84■□□□□ 0.61
CXCL13O43927 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL13O43927 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.84■□□□□ 0.61
CXCL13O43927 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.84■□□□□ 0.61
CXCL13O43927 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CXCL13O43927 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL13O43927 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.84■□□□□ 0.61
CXCL13O43927 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.84■□□□□ 0.61
CXCL13O43927 AC080038.1-201ENST00000611274 1154 ntBASIC18.84■□□□□ 0.61
CXCL13O43927 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.84■□□□□ 0.61
CXCL13O43927 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL13O43927 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CXCL13O43927 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXCL13O43927 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CXCL13O43927 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.83■□□□□ 0.61
CXCL13O43927 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CXCL13O43927 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CXCL13O43927 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CXCL13O43927 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.83■□□□□ 0.61
CXCL13O43927 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.83■□□□□ 0.61
CXCL13O43927 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CXCL13O43927 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.83■□□□□ 0.6
CXCL13O43927 MFSD11-216ENST00000590393 1141 ntBASIC18.83■□□□□ 0.6
CXCL13O43927 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.83■□□□□ 0.6
CXCL13O43927 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
CXCL13O43927 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.83■□□□□ 0.6
CXCL13O43927 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL13O43927 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL13O43927 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.82■□□□□ 0.6
CXCL13O43927 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CXCL13O43927 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL13O43927 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL13O43927 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CXCL13O43927 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.82■□□□□ 0.6
CXCL13O43927 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL13O43927 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL13O43927 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.82■□□□□ 0.6
CXCL13O43927 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL13O43927 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.82■□□□□ 0.6
CXCL13O43927 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.82■□□□□ 0.6
CXCL13O43927 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL13O43927 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL13O43927 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CXCL13O43927 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL13O43927 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL13O43927 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CXCL13O43927 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL13O43927 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.82■□□□□ 0.6
CXCL13O43927 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL13O43927 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.81■□□□□ 0.6
CXCL13O43927 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL13O43927 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CXCL13O43927 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.81■□□□□ 0.6
CXCL13O43927 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL13O43927 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL13O43927 AC079834.2-201ENST00000609776 1949 ntBASIC18.81■□□□□ 0.6
CXCL13O43927 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL13O43927 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL13O43927 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.81■□□□□ 0.6
CXCL13O43927 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL13O43927 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.81■□□□□ 0.6
CXCL13O43927 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.81■□□□□ 0.6
CXCL13O43927 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL13O43927 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL13O43927 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms