Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PRICKLE3O43900 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRICKLE3O43900 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.25■□□□□ 0.83
PRICKLE3O43900 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRICKLE3O43900 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRICKLE3O43900 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRICKLE3O43900 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PRICKLE3O43900 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.25■□□□□ 0.83
PRICKLE3O43900 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.25■□□□□ 0.83
PRICKLE3O43900 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PRICKLE3O43900 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.25■□□□□ 0.83
PRICKLE3O43900 MYCNOS-205ENST00000641950 531 ntBASIC20.25■□□□□ 0.83
PRICKLE3O43900 KRT16P2-201ENST00000414673 1423 ntBASIC20.25■□□□□ 0.83
PRICKLE3O43900 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRICKLE3O43900 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.25■□□□□ 0.83
PRICKLE3O43900 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRICKLE3O43900 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE3O43900 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE3O43900 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE3O43900 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PRICKLE3O43900 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE3O43900 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.24■□□□□ 0.83
PRICKLE3O43900 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE3O43900 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE3O43900 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.24■□□□□ 0.83
PRICKLE3O43900 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PRICKLE3O43900 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.24■□□□□ 0.83
PRICKLE3O43900 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE3O43900 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.24■□□□□ 0.83
PRICKLE3O43900 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.24■□□□□ 0.83
PRICKLE3O43900 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.24■□□□□ 0.83
PRICKLE3O43900 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE3O43900 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE3O43900 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE3O43900 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRICKLE3O43900 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRICKLE3O43900 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRICKLE3O43900 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PRICKLE3O43900 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRICKLE3O43900 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PRICKLE3O43900 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.23■□□□□ 0.83
PRICKLE3O43900 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRICKLE3O43900 AC004911.1-201ENST00000416316 871 ntBASIC20.23■□□□□ 0.83
PRICKLE3O43900 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.23■□□□□ 0.83
PRICKLE3O43900 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.23■□□□□ 0.83
PRICKLE3O43900 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.23■□□□□ 0.83
PRICKLE3O43900 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.23■□□□□ 0.83
PRICKLE3O43900 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.23■□□□□ 0.83
PRICKLE3O43900 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.22■□□□□ 0.83
PRICKLE3O43900 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRICKLE3O43900 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRICKLE3O43900 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRICKLE3O43900 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.22■□□□□ 0.83
PRICKLE3O43900 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRICKLE3O43900 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRICKLE3O43900 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PRICKLE3O43900 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PRICKLE3O43900 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRICKLE3O43900 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PRICKLE3O43900 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRICKLE3O43900 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRICKLE3O43900 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.22■□□□□ 0.83
PRICKLE3O43900 MFSD11-216ENST00000590393 1141 ntBASIC20.22■□□□□ 0.83
PRICKLE3O43900 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.22■□□□□ 0.83
PRICKLE3O43900 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PRICKLE3O43900 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRICKLE3O43900 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.21■□□□□ 0.83
PRICKLE3O43900 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRICKLE3O43900 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PRICKLE3O43900 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.21■□□□□ 0.83
PRICKLE3O43900 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRICKLE3O43900 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRICKLE3O43900 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.21■□□□□ 0.83
PRICKLE3O43900 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRICKLE3O43900 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRICKLE3O43900 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.21■□□□□ 0.83
PRICKLE3O43900 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
PRICKLE3O43900 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.21■□□□□ 0.83
PRICKLE3O43900 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PRICKLE3O43900 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRICKLE3O43900 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.21■□□□□ 0.83
PRICKLE3O43900 Z98882.1-201ENST00000622160 2253 ntBASIC20.21■□□□□ 0.83
PRICKLE3O43900 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PRICKLE3O43900 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PRICKLE3O43900 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PRICKLE3O43900 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.2■□□□□ 0.83
PRICKLE3O43900 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.2■□□□□ 0.82
PRICKLE3O43900 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRICKLE3O43900 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRICKLE3O43900 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRICKLE3O43900 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRICKLE3O43900 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRICKLE3O43900 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PRICKLE3O43900 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.2■□□□□ 0.82
PRICKLE3O43900 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.2■□□□□ 0.82
PRICKLE3O43900 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.2■□□□□ 0.82
PRICKLE3O43900 AC011767.1-201ENST00000617410 1153 ntBASIC20.2■□□□□ 0.82
PRICKLE3O43900 AC120498.10-201ENST00000621827 505 ntBASIC20.2■□□□□ 0.82
PRICKLE3O43900 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.2■□□□□ 0.82
PRICKLE3O43900 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms