Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC27.17■■□□□ 1.94
KCNQ3O43525 AC243732.1-201ENST00000612648 864 ntBASIC27.17■■□□□ 1.94
KCNQ3O43525 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC27.17■■□□□ 1.94
KCNQ3O43525 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC27.17■■□□□ 1.94
KCNQ3O43525 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
KCNQ3O43525 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
KCNQ3O43525 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
KCNQ3O43525 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
KCNQ3O43525 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
KCNQ3O43525 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
KCNQ3O43525 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
KCNQ3O43525 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
KCNQ3O43525 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
KCNQ3O43525 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
KCNQ3O43525 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC27.16■■□□□ 1.94
KCNQ3O43525 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
KCNQ3O43525 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
KCNQ3O43525 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC27.15■■□□□ 1.94
KCNQ3O43525 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC27.15■■□□□ 1.94
KCNQ3O43525 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
KCNQ3O43525 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC27.15■■□□□ 1.94
KCNQ3O43525 AC069236.1-201ENST00000604339 616 ntBASIC27.15■■□□□ 1.94
KCNQ3O43525 AL591742.1-201ENST00000604433 565 ntBASIC27.15■■□□□ 1.94
KCNQ3O43525 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC27.15■■□□□ 1.94
KCNQ3O43525 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC27.15■■□□□ 1.94
KCNQ3O43525 TMEM191A-211ENST00000637163 1067 ntBASIC27.15■■□□□ 1.94
KCNQ3O43525 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
KCNQ3O43525 ME2-206ENST00000638410 2289 ntTSL 5 BASIC27.15■■□□□ 1.94
KCNQ3O43525 ME2-210ENST00000639255 2262 ntTSL 5 BASIC27.15■■□□□ 1.94
KCNQ3O43525 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.15■■□□□ 1.94
KCNQ3O43525 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
KCNQ3O43525 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
KCNQ3O43525 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
KCNQ3O43525 BX276092.2-201ENST00000417668 665 ntBASIC27.14■■□□□ 1.94
KCNQ3O43525 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC27.14■■□□□ 1.94
KCNQ3O43525 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC27.14■■□□□ 1.94
KCNQ3O43525 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC27.14■■□□□ 1.94
KCNQ3O43525 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC27.14■■□□□ 1.94
KCNQ3O43525 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC27.14■■□□□ 1.94
KCNQ3O43525 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC27.14■■□□□ 1.94
KCNQ3O43525 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC27.14■■□□□ 1.94
KCNQ3O43525 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.93
KCNQ3O43525 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
KCNQ3O43525 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
KCNQ3O43525 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
KCNQ3O43525 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
KCNQ3O43525 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
KCNQ3O43525 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
KCNQ3O43525 RARRES2P4-201ENST00000514074 484 ntBASIC27.13■■□□□ 1.93
KCNQ3O43525 MIR4758-201ENST00000577688 71 ntBASIC27.13■■□□□ 1.93
KCNQ3O43525 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC27.13■■□□□ 1.93
KCNQ3O43525 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
KCNQ3O43525 AC010980.2-201ENST00000587099 1412 ntBASIC27.13■■□□□ 1.93
KCNQ3O43525 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
KCNQ3O43525 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
KCNQ3O43525 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
KCNQ3O43525 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
KCNQ3O43525 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
KCNQ3O43525 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
KCNQ3O43525 AC091799.1-201ENST00000422823 811 ntBASIC27.12■■□□□ 1.93
KCNQ3O43525 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
KCNQ3O43525 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC27.12■■□□□ 1.93
KCNQ3O43525 TBCB-214ENST00000629269 413 ntTSL 5 BASIC27.12■■□□□ 1.93
KCNQ3O43525 AC008694.1-202ENST00000636953 945 ntBASIC27.12■■□□□ 1.93
KCNQ3O43525 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC27.12■■□□□ 1.93
KCNQ3O43525 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
KCNQ3O43525 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC27.12■■□□□ 1.93
KCNQ3O43525 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
KCNQ3O43525 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
KCNQ3O43525 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
KCNQ3O43525 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
KCNQ3O43525 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
KCNQ3O43525 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
KCNQ3O43525 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC27.11■■□□□ 1.93
KCNQ3O43525 AC083880.1-201ENST00000608266 535 ntBASIC27.11■■□□□ 1.93
KCNQ3O43525 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
KCNQ3O43525 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
KCNQ3O43525 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC27.11■■□□□ 1.93
KCNQ3O43525 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
KCNQ3O43525 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
KCNQ3O43525 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
KCNQ3O43525 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
KCNQ3O43525 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
KCNQ3O43525 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC27.1■■□□□ 1.93
KCNQ3O43525 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC27.1■■□□□ 1.93
KCNQ3O43525 AC092118.2-201ENST00000613495 667 ntBASIC27.1■■□□□ 1.93
KCNQ3O43525 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC27.1■■□□□ 1.93
KCNQ3O43525 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC27.1■■□□□ 1.93
KCNQ3O43525 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC27.09■■□□□ 1.93
KCNQ3O43525 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
KCNQ3O43525 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC27.09■■□□□ 1.93
KCNQ3O43525 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC27.09■■□□□ 1.93
KCNQ3O43525 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC27.09■■□□□ 1.93
KCNQ3O43525 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC27.09■■□□□ 1.93
KCNQ3O43525 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
KCNQ3O43525 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
KCNQ3O43525 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
KCNQ3O43525 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
KCNQ3O43525 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
KCNQ3O43525 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms