Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RRP8O43159 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
RRP8O43159 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.83■□□□□ 0.77
RRP8O43159 AC008403.3-201ENST00000598924 454 ntBASIC19.83■□□□□ 0.77
RRP8O43159 Z99916.2-201ENST00000604037 246 ntBASIC19.83■□□□□ 0.77
RRP8O43159 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.83■□□□□ 0.77
RRP8O43159 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RRP8O43159 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
RRP8O43159 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RRP8O43159 RBM17P2-201ENST00000616397 1405 ntBASIC19.83■□□□□ 0.76
RRP8O43159 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RRP8O43159 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.76
RRP8O43159 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RRP8O43159 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RRP8O43159 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.82■□□□□ 0.76
RRP8O43159 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
RRP8O43159 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RRP8O43159 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
RRP8O43159 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RRP8O43159 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RRP8O43159 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
RRP8O43159 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
RRP8O43159 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.82■□□□□ 0.76
RRP8O43159 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
RRP8O43159 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.82■□□□□ 0.76
RRP8O43159 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.82■□□□□ 0.76
RRP8O43159 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RRP8O43159 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.82■□□□□ 0.76
RRP8O43159 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.82■□□□□ 0.76
RRP8O43159 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RRP8O43159 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RRP8O43159 KRT16P2-201ENST00000414673 1423 ntBASIC19.82■□□□□ 0.76
RRP8O43159 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RRP8O43159 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.81■□□□□ 0.76
RRP8O43159 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RRP8O43159 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.81■□□□□ 0.76
RRP8O43159 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RRP8O43159 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RRP8O43159 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RRP8O43159 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RRP8O43159 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.81■□□□□ 0.76
RRP8O43159 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RRP8O43159 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.81■□□□□ 0.76
RRP8O43159 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RRP8O43159 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RRP8O43159 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.81■□□□□ 0.76
RRP8O43159 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RRP8O43159 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RRP8O43159 AC133561.1-201ENST00000568600 2415 ntBASIC19.81■□□□□ 0.76
RRP8O43159 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RRP8O43159 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RRP8O43159 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RRP8O43159 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RRP8O43159 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.8■□□□□ 0.76
RRP8O43159 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RRP8O43159 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RRP8O43159 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RRP8O43159 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RRP8O43159 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RRP8O43159 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RRP8O43159 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RRP8O43159 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RRP8O43159 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RRP8O43159 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.8■□□□□ 0.76
RRP8O43159 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RRP8O43159 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.8■□□□□ 0.76
RRP8O43159 RN7SL471P-201ENST00000580476 299 ntBASIC19.8■□□□□ 0.76
RRP8O43159 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.8■□□□□ 0.76
RRP8O43159 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RRP8O43159 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.8■□□□□ 0.76
RRP8O43159 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RRP8O43159 AP006587.3-201ENST00000525742 1516 ntBASIC19.8■□□□□ 0.76
RRP8O43159 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RRP8O43159 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RRP8O43159 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RRP8O43159 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
RRP8O43159 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.79■□□□□ 0.76
RRP8O43159 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RRP8O43159 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RRP8O43159 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.79■□□□□ 0.76
RRP8O43159 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.79■□□□□ 0.76
RRP8O43159 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.79■□□□□ 0.76
RRP8O43159 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.79■□□□□ 0.76
RRP8O43159 AC243732.1-201ENST00000612648 864 ntBASIC19.79■□□□□ 0.76
RRP8O43159 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.79■□□□□ 0.76
RRP8O43159 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.79■□□□□ 0.76
RRP8O43159 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RRP8O43159 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.79■□□□□ 0.76
RRP8O43159 AC068473.5-201ENST00000616428 2072 ntBASIC19.79■□□□□ 0.76
RRP8O43159 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.79■□□□□ 0.76
RRP8O43159 KRT17P2-201ENST00000300992 1314 ntBASIC19.78■□□□□ 0.76
RRP8O43159 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RRP8O43159 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RRP8O43159 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RRP8O43159 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.78■□□□□ 0.76
RRP8O43159 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
RRP8O43159 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.78■□□□□ 0.76
RRP8O43159 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
RRP8O43159 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.78■□□□□ 0.76
RRP8O43159 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms