Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 MERTK-201ENST00000295408 3954 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.57e-6■■□□□ 12.8
NKRFO15226 PAXIP1-201ENST00000397192 3711 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.517e-6■■□□□ 12.8
NKRFO15226 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.527e-6■■□□□ 12.8
NKRFO15226 MERTK-204ENST00000439966 2972 ntTSL 1 (best)11.69□□□□□ -0.547e-6■■□□□ 12.8
NKRFO15226 MADD-210ENST00000407859 5744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.557e-6■■□□□ 12.8
NKRFO15226 SP2-203ENST00000635868 342 ntTSL 511.63□□□□□ -0.557e-7■■□□□ 12.8
NKRFO15226 SGPL1-202ENST00000373202 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.557e-6■■□□□ 12.8
NKRFO15226 AFMID-203ENST00000585419 493 ntTSL 311.34□□□□□ -0.597e-6■■□□□ 12.8
NKRFO15226 SP2-205ENST00000637943 481 ntTSL 211.24□□□□□ -0.617e-7■■□□□ 12.8
NKRFO15226 ATXN7L3-201ENST00000389384 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.617e-6■■□□□ 12.8
NKRFO15226 MADD-202ENST00000342922 6005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.617e-6■■□□□ 12.8
NKRFO15226 AFMID-214ENST00000591952 582 ntTSL 2 BASIC10.84□□□□□ -0.677e-6■■□□□ 12.8
NKRFO15226 MADD-205ENST00000395344 4988 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.737e-6■■□□□ 12.8
NKRFO15226 MERTK-202ENST00000409780 3189 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.787e-6■■□□□ 12.8
NKRFO15226 GNAI2-211ENST00000491100 3886 ntTSL 29.33□□□□□ -0.927e-6■■□□□ 12.8
NKRFO15226 CUX1-219ENST00000606749 601 ntTSL 48.91□□□□□ -0.987e-6■■□□□ 12.8
NKRFO15226 MADD-212ENST00000428807 549 ntTSL 47.15□□□□□ -1.267e-6■■□□□ 12.8
NKRFO15226 PAXIP1-203ENST00000419436 521 ntTSL 47.09□□□□□ -1.277e-6■■□□□ 12.8
NKRFO15226 SPRED2-205ENST00000440972 555 ntTSL 315.02■□□□□ -05e-9■■□□□ 12.8
NKRFO15226 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC13.68□□□□□ -0.225e-9■■□□□ 12.8
NKRFO15226 HIPK2-203ENST00000428878 3969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.482e-7■■□□□ 12.8
NKRFO15226 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.292e-7■■□□□ 12.8
NKRFO15226 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.13e-6■■□□□ 12.8
NKRFO15226 KLF16-202ENST00000541015 1134 ntTSL 1 (best)25.85■■□□□ 1.733e-6■■□□□ 12.8
NKRFO15226 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.033e-6■■□□□ 12.8
NKRFO15226 FAM102A-206ENST00000493175 423 ntTSL 315.03■□□□□ -04e-6■■□□□ 12.8
NKRFO15226 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.481e-6■■□□□ 12.8
NKRFO15226 NADK-212ENST00000492768 859 ntTSL 329.49■■■□□ 2.311e-6■■□□□ 12.8
NKRFO15226 NADK-205ENST00000460602 974 ntTSL 229.49■■■□□ 2.311e-6■■□□□ 12.8
NKRFO15226 PRPSAP1-205ENST00000442767 908 ntTSL 526.47■■□□□ 1.831e-6■■□□□ 12.8
NKRFO15226 NADK-213ENST00000492845 937 ntTSL 221.2■□□□□ 0.981e-6■■□□□ 12.8
NKRFO15226 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.931e-6■■□□□ 12.8
NKRFO15226 RNF215-201ENST00000215798 1651 ntAPPRIS ALT2 TSL 519.49■□□□□ 0.711e-6■■□□□ 12.8
NKRFO15226 PRPSAP1-202ENST00000423915 549 ntTSL 419.33■□□□□ 0.681e-6■■□□□ 12.8
NKRFO15226 GSE1-213ENST00000568080 289 ntTSL 517.25■□□□□ 0.351e-6■■□□□ 12.8
NKRFO15226 FAM102A-207ENST00000494606 536 ntTSL 316.86■□□□□ 0.291e-6■■□□□ 12.8
NKRFO15226 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.071e-6■■□□□ 12.8
NKRFO15226 AGXT-203ENST00000472436 1034 ntTSL 215.42■□□□□ 0.061e-7■■□□□ 12.8
NKRFO15226 RNF215-205ENST00000431544 535 ntTSL 313.81□□□□□ -0.21e-6■■□□□ 12.8
NKRFO15226 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.221e-6■■□□□ 12.8
NKRFO15226 NADK-204ENST00000378625 3653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.331e-6■■□□□ 12.8
NKRFO15226 RAP1GAP-208ENST00000464457 409 ntTSL 39.85□□□□□ -0.831e-6■■□□□ 12.8
NKRFO15226 PHC2-212ENST00000493483 760 ntTSL 327.24■■□□□ 1.955e-6■■□□□ 12.8
NKRFO15226 PHC2-206ENST00000467894 1466 ntTSL 526.33■■□□□ 1.815e-6■■□□□ 12.8
NKRFO15226 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.645e-6■■□□□ 12.8
NKRFO15226 PHC2-210ENST00000485928 2548 ntTSL 225.24■■□□□ 1.635e-6■■□□□ 12.8
NKRFO15226 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.245e-6■■□□□ 12.8
NKRFO15226 PHC2-203ENST00000373422 2799 ntTSL 2 BASIC13.36□□□□□ -0.275e-6■■□□□ 12.8
NKRFO15226 PHC2-204ENST00000431992 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.485e-6■■□□□ 12.8
NKRFO15226 PHC2-211ENST00000486897 547 ntTSL 511.45□□□□□ -0.585e-6■■□□□ 12.8
NKRFO15226 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC15.36■□□□□ 0.056e-8■■□□□ 12.8
NKRFO15226 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.191e-8■■□□□ 12.8
NKRFO15226 ZFX-207ENST00000459724 673 ntTSL 526.86■■□□□ 1.891e-6■■□□□ 12.8
NKRFO15226 ZFX-210ENST00000497813 475 ntTSL 518.81■□□□□ 0.61e-6■■□□□ 12.8
NKRFO15226 ZFX-205ENST00000419690 300 ntTSL 215.28■□□□□ 0.041e-6■■□□□ 12.8
NKRFO15226 ZFX-206ENST00000428571 600 ntTSL 215.22■□□□□ 0.031e-6■■□□□ 12.8
NKRFO15226 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.091e-6■■□□□ 12.8
NKRFO15226 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.16□□□□□ -1.11e-6■■□□□ 12.8
NKRFO15226 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.7□□□□□ -1.51e-6■■□□□ 12.8
NKRFO15226 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.581e-6■■□□□ 12.8
NKRFO15226 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.652e-6■■□□□ 12.8
NKRFO15226 UBE2G1-203ENST00000571980 984 ntTSL 524.84■■□□□ 1.571e-8■■□□□ 12.8
NKRFO15226 UBE2G1-206ENST00000574633 863 ntTSL 223.63■■□□□ 1.371e-8■■□□□ 12.8
NKRFO15226 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.53■□□□□ 0.721e-8■■□□□ 12.8
NKRFO15226 UBE2G1-201ENST00000396981 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31e-8■■□□□ 12.8
NKRFO15226 AGAP1-203ENST00000402604 563 ntTSL 414.37□□□□□ -0.114e-7■■□□□ 12.8
NKRFO15226 DMTN-222ENST00000523623 581 ntTSL 320.45■□□□□ 0.868e-7■■□□□ 12.8
NKRFO15226 MYC-204ENST00000520751 577 ntTSL 321.89■■□□□ 1.091e-6■■□□□ 12.8
NKRFO15226 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.16■□□□□ 0.981e-6■■□□□ 12.8
NKRFO15226 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.951e-6■■□□□ 12.8
NKRFO15226 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.871e-6■■□□□ 12.8
NKRFO15226 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.661e-6■■□□□ 12.8
NKRFO15226 MYC-203ENST00000517291 1023 ntTSL 1 (best)16.94■□□□□ 0.31e-6■■□□□ 12.8
NKRFO15226 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.051e-6■■□□□ 12.8
NKRFO15226 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.494e-8■■□□□ 12.8
NKRFO15226 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.594e-8■■□□□ 12.8
NKRFO15226 ARID1A-216ENST00000637465 699 ntTSL 54.51□□□□□ -1.694e-8■■□□□ 12.8
NKRFO15226 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.185e-8■■□□□ 12.8
NKRFO15226 GDI2-206ENST00000456041 918 ntTSL 513.74□□□□□ -0.215e-8■■□□□ 12.8
NKRFO15226 GDI2-209ENST00000609712 622 ntTSL 313.42□□□□□ -0.265e-8■■□□□ 12.8
NKRFO15226 GDI2-204ENST00000418688 636 ntTSL 513.4□□□□□ -0.265e-8■■□□□ 12.8
NKRFO15226 GDI2-202ENST00000380181 1408 ntTSL 1 (best) BASIC12.92□□□□□ -0.345e-8■■□□□ 12.8
NKRFO15226 GDI2-208ENST00000608581 634 ntTSL 310.07□□□□□ -0.85e-8■■□□□ 12.8
NKRFO15226 GDI2-201ENST00000380127 584 ntTSL 39.98□□□□□ -0.815e-8■■□□□ 12.8
NKRFO15226 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.05■□□□□ 0.161e-6■■□□□ 12.8
NKRFO15226 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.08■□□□□ 0.322e-8■■□□□ 12.8
NKRFO15226 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC10.18□□□□□ -0.782e-8■■□□□ 12.8
NKRFO15226 PXDC1-201ENST00000380277 1538 ntTSL 316.96■□□□□ 0.315e-7■■□□□ 12.8
NKRFO15226 KIAA0368-206ENST00000602978 539 ntAPPRIS ALT2 TSL 423.44■■□□□ 1.341e-6■■□□□ 12.8
NKRFO15226 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.11e-6■■□□□ 12.8
NKRFO15226 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.521e-6■■□□□ 12.8
NKRFO15226 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -18e-10■■□□□ 12.7
NKRFO15226 EXOC3L4-207ENST00000560925 2341 ntTSL 226.37■■□□□ 1.812e-7■■□□□ 12.7
NKRFO15226 EXOC3L4-206ENST00000560304 657 ntTSL 324.32■■□□□ 1.482e-7■■□□□ 12.7
NKRFO15226 EXOC3L4-204ENST00000559693 813 ntTSL 319.97■□□□□ 0.792e-7■■□□□ 12.7
NKRFO15226 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.614e-7■■□□□ 12.7
NKRFO15226 LRMDA-209ENST00000593699 1124 ntTSL 1 (best)12.75□□□□□ -0.372e-10■■□□□ 12.7
NKRFO15226 LRMDA-210ENST00000593817 221 ntTSL 35.91□□□□□ -1.462e-10■■□□□ 12.7
NKRFO15226 MIDN-202ENST00000586757 1163 ntAPPRIS ALT2 TSL 528.26■■■□□ 2.116e-7■■□□□ 12.7
NKRFO15226 CUX1-216ENST00000558469 588 ntTSL 410.82□□□□□ -0.685e-6■■□□□ 12.7
Retrieved 100 of 9,198 protein–RNA pairs in 74.9 ms