Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASQ2O14958 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASQ2O14958 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASQ2O14958 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CASQ2O14958 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CASQ2O14958 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.97■□□□□ 0.79
CASQ2O14958 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASQ2O14958 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASQ2O14958 AC004687.1-201ENST00000579003 1625 ntBASIC19.97■□□□□ 0.79
CASQ2O14958 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.97■□□□□ 0.79
CASQ2O14958 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASQ2O14958 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CASQ2O14958 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CASQ2O14958 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CASQ2O14958 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CASQ2O14958 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CASQ2O14958 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CASQ2O14958 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.96■□□□□ 0.79
CASQ2O14958 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CASQ2O14958 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CASQ2O14958 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CASQ2O14958 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CASQ2O14958 AC022616.5-201ENST00000518796 181 ntBASIC19.96■□□□□ 0.79
CASQ2O14958 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.96■□□□□ 0.79
CASQ2O14958 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CASQ2O14958 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CASQ2O14958 AC006128.1-201ENST00000624704 1661 ntBASIC19.96■□□□□ 0.79
CASQ2O14958 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.96■□□□□ 0.79
CASQ2O14958 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.96■□□□□ 0.79
CASQ2O14958 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CASQ2O14958 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CASQ2O14958 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.95■□□□□ 0.79
CASQ2O14958 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.95■□□□□ 0.79
CASQ2O14958 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
CASQ2O14958 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASQ2O14958 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASQ2O14958 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.95■□□□□ 0.78
CASQ2O14958 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASQ2O14958 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASQ2O14958 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASQ2O14958 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CASQ2O14958 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CASQ2O14958 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.95■□□□□ 0.78
CASQ2O14958 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASQ2O14958 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASQ2O14958 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CASQ2O14958 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CASQ2O14958 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASQ2O14958 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.95■□□□□ 0.78
CASQ2O14958 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASQ2O14958 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASQ2O14958 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CASQ2O14958 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASQ2O14958 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASQ2O14958 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASQ2O14958 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CASQ2O14958 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.94■□□□□ 0.78
CASQ2O14958 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CASQ2O14958 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CASQ2O14958 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CASQ2O14958 SMG8-203ENST00000578922 2178 ntBASIC19.94■□□□□ 0.78
CASQ2O14958 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CASQ2O14958 PCDHAC2-203ENST00000615316 3011 ntBASIC19.94■□□□□ 0.78
CASQ2O14958 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CASQ2O14958 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CASQ2O14958 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
CASQ2O14958 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CASQ2O14958 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CASQ2O14958 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CASQ2O14958 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CASQ2O14958 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CASQ2O14958 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CASQ2O14958 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.93■□□□□ 0.78
CASQ2O14958 BX323043.1-201ENST00000641006 1765 ntBASIC19.93■□□□□ 0.78
CASQ2O14958 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CASQ2O14958 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CASQ2O14958 AC090340.1-201ENST00000620778 4980 ntBASIC19.93■□□□□ 0.78
CASQ2O14958 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.93■□□□□ 0.78
CASQ2O14958 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.93■□□□□ 0.78
CASQ2O14958 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASQ2O14958 AL592293.1-201ENST00000502889 1188 ntBASIC19.93■□□□□ 0.78
CASQ2O14958 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CASQ2O14958 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASQ2O14958 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CASQ2O14958 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASQ2O14958 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CASQ2O14958 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.93■□□□□ 0.78
CASQ2O14958 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASQ2O14958 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASQ2O14958 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.92■□□□□ 0.78
CASQ2O14958 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.92■□□□□ 0.78
CASQ2O14958 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASQ2O14958 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASQ2O14958 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CASQ2O14958 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.92■□□□□ 0.78
CASQ2O14958 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CASQ2O14958 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CASQ2O14958 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CASQ2O14958 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CASQ2O14958 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms