Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H3BM21 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H3BM21 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.93■□□□□ 0.94
H3BM21 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H3BM21 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H3BM21 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
H3BM21 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.92■□□□□ 0.94
H3BM21 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.92■□□□□ 0.94
H3BM21 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H3BM21 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
H3BM21 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.92■□□□□ 0.94
H3BM21 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
H3BM21 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
H3BM21 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.92■□□□□ 0.94
H3BM21 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.92■□□□□ 0.94
H3BM21 AC010536.3-201ENST00000620306 533 ntBASIC20.92■□□□□ 0.94
H3BM21 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
H3BM21 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
H3BM21 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H3BM21 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
H3BM21 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
H3BM21 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
H3BM21 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
H3BM21 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.92■□□□□ 0.94
H3BM21 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.91■□□□□ 0.94
H3BM21 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H3BM21 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
H3BM21 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H3BM21 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
H3BM21 SLC29A4P1-201ENST00000398760 971 ntBASIC20.91■□□□□ 0.94
H3BM21 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H3BM21 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.91■□□□□ 0.94
H3BM21 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
H3BM21 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
H3BM21 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
H3BM21 AC083906.2-201ENST00000511578 360 ntBASIC20.91■□□□□ 0.94
H3BM21 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
H3BM21 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
H3BM21 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.91■□□□□ 0.94
H3BM21 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
H3BM21 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
H3BM21 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H3BM21 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
H3BM21 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.9■□□□□ 0.94
H3BM21 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.9■□□□□ 0.94
H3BM21 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
H3BM21 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.9■□□□□ 0.94
H3BM21 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
H3BM21 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.9■□□□□ 0.94
H3BM21 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
H3BM21 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.9■□□□□ 0.94
H3BM21 SLC7A5P1-201ENST00000568957 537 ntBASIC20.9■□□□□ 0.94
H3BM21 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H3BM21 AL050303.2-201ENST00000619798 666 ntBASIC20.9■□□□□ 0.94
H3BM21 AC120498.10-201ENST00000621827 505 ntBASIC20.9■□□□□ 0.94
H3BM21 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H3BM21 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
H3BM21 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
H3BM21 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
H3BM21 AC026471.6-201ENST00000622954 1905 ntBASIC20.9■□□□□ 0.94
H3BM21 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
H3BM21 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
H3BM21 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
H3BM21 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
H3BM21 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.89■□□□□ 0.93
H3BM21 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.89■□□□□ 0.93
H3BM21 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.89■□□□□ 0.93
H3BM21 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.89■□□□□ 0.93
H3BM21 AC013268.1-206ENST00000638368 961 ntBASIC20.89■□□□□ 0.93
H3BM21 AC112229.1-201ENST00000639295 961 ntBASIC20.89■□□□□ 0.93
H3BM21 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.89■□□□□ 0.93
H3BM21 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
H3BM21 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
H3BM21 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
H3BM21 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.89■□□□□ 0.93
H3BM21 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H3BM21 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H3BM21 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
H3BM21 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
H3BM21 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.88■□□□□ 0.93
H3BM21 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H3BM21 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
H3BM21 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
H3BM21 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H3BM21 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
H3BM21 TSPY6P-201ENST00000448518 926 ntBASIC20.88■□□□□ 0.93
H3BM21 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.88■□□□□ 0.93
H3BM21 AC008175.2-201ENST00000612840 297 ntBASIC20.88■□□□□ 0.93
H3BM21 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
H3BM21 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.88■□□□□ 0.93
H3BM21 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
H3BM21 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H3BM21 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H3BM21 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3BM21 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3BM21 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3BM21 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3BM21 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
H3BM21 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
H3BM21 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms