Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01548A6NM66 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.63■□□□□ 0.25
LINC01548A6NM66 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01548A6NM66 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01548A6NM66 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.63■□□□□ 0.25
LINC01548A6NM66 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.63■□□□□ 0.25
LINC01548A6NM66 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.63■□□□□ 0.25
LINC01548A6NM66 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.63■□□□□ 0.25
LINC01548A6NM66 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.63■□□□□ 0.25
LINC01548A6NM66 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01548A6NM66 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LINC01548A6NM66 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.63■□□□□ 0.25
LINC01548A6NM66 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01548A6NM66 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01548A6NM66 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01548A6NM66 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01548A6NM66 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01548A6NM66 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01548A6NM66 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.63■□□□□ 0.25
LINC01548A6NM66 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.63■□□□□ 0.25
LINC01548A6NM66 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LINC01548A6NM66 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01548A6NM66 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.62■□□□□ 0.25
LINC01548A6NM66 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.62■□□□□ 0.25
LINC01548A6NM66 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.62■□□□□ 0.25
LINC01548A6NM66 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.62■□□□□ 0.25
LINC01548A6NM66 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01548A6NM66 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01548A6NM66 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LINC01548A6NM66 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01548A6NM66 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.62■□□□□ 0.25
LINC01548A6NM66 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.62■□□□□ 0.25
LINC01548A6NM66 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.62■□□□□ 0.25
LINC01548A6NM66 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
LINC01548A6NM66 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.62■□□□□ 0.25
LINC01548A6NM66 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01548A6NM66 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LINC01548A6NM66 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01548A6NM66 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.62■□□□□ 0.25
LINC01548A6NM66 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.62■□□□□ 0.25
LINC01548A6NM66 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01548A6NM66 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.61■□□□□ 0.25
LINC01548A6NM66 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.61■□□□□ 0.25
LINC01548A6NM66 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01548A6NM66 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01548A6NM66 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01548A6NM66 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LINC01548A6NM66 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01548A6NM66 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.61■□□□□ 0.25
LINC01548A6NM66 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01548A6NM66 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.61■□□□□ 0.25
LINC01548A6NM66 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.61■□□□□ 0.25
LINC01548A6NM66 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01548A6NM66 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01548A6NM66 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01548A6NM66 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.61■□□□□ 0.25
LINC01548A6NM66 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.61■□□□□ 0.25
LINC01548A6NM66 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01548A6NM66 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.61■□□□□ 0.25
LINC01548A6NM66 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01548A6NM66 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.61■□□□□ 0.25
LINC01548A6NM66 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01548A6NM66 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
LINC01548A6NM66 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.61■□□□□ 0.25
LINC01548A6NM66 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01548A6NM66 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01548A6NM66 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01548A6NM66 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01548A6NM66 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.6■□□□□ 0.25
LINC01548A6NM66 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01548A6NM66 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.6■□□□□ 0.25
LINC01548A6NM66 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.6■□□□□ 0.25
LINC01548A6NM66 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.6■□□□□ 0.25
LINC01548A6NM66 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01548A6NM66 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LINC01548A6NM66 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01548A6NM66 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.6■□□□□ 0.25
LINC01548A6NM66 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LINC01548A6NM66 AC008175.2-201ENST00000612840 297 ntBASIC16.6■□□□□ 0.25
LINC01548A6NM66 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LINC01548A6NM66 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LINC01548A6NM66 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LINC01548A6NM66 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01548A6NM66 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01548A6NM66 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01548A6NM66 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01548A6NM66 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.59■□□□□ 0.25
LINC01548A6NM66 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01548A6NM66 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01548A6NM66 AC244015.2-201ENST00000616358 1861 ntBASIC16.59■□□□□ 0.25
LINC01548A6NM66 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01548A6NM66 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01548A6NM66 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01548A6NM66 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01548A6NM66 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01548A6NM66 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.59■□□□□ 0.25
LINC01548A6NM66 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.59■□□□□ 0.25
LINC01548A6NM66 AC080038.1-201ENST00000611274 1154 ntBASIC16.59■□□□□ 0.25
LINC01548A6NM66 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01548A6NM66 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms