Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LRRC53A6NM62 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LRRC53A6NM62 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.67■■□□□ 1.22
LRRC53A6NM62 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
LRRC53A6NM62 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LRRC53A6NM62 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC53A6NM62 AC009237.3-201ENST00000393279 1427 ntBASIC22.66■■□□□ 1.22
LRRC53A6NM62 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.66■■□□□ 1.22
LRRC53A6NM62 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.66■■□□□ 1.22
LRRC53A6NM62 TSPY26P-201ENST00000476365 1326 ntBASIC22.66■■□□□ 1.22
LRRC53A6NM62 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC53A6NM62 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC53A6NM62 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
LRRC53A6NM62 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.66■■□□□ 1.22
LRRC53A6NM62 AC096631.2-201ENST00000436136 790 ntBASIC22.66■■□□□ 1.22
LRRC53A6NM62 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC53A6NM62 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.66■■□□□ 1.22
LRRC53A6NM62 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC53A6NM62 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
LRRC53A6NM62 FEM1AP1-201ENST00000431297 1995 ntBASIC22.66■■□□□ 1.22
LRRC53A6NM62 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
LRRC53A6NM62 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC53A6NM62 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC53A6NM62 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC53A6NM62 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC53A6NM62 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.65■■□□□ 1.22
LRRC53A6NM62 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC53A6NM62 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
LRRC53A6NM62 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC53A6NM62 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
LRRC53A6NM62 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.65■■□□□ 1.22
LRRC53A6NM62 AC105233.4-201ENST00000642045 216 ntBASIC22.65■■□□□ 1.22
LRRC53A6NM62 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC53A6NM62 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.65■■□□□ 1.22
LRRC53A6NM62 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC53A6NM62 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
LRRC53A6NM62 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
LRRC53A6NM62 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
LRRC53A6NM62 PLK5-205ENST00000642079 1969 ntBASIC22.64■■□□□ 1.21
LRRC53A6NM62 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LRRC53A6NM62 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.64■■□□□ 1.21
LRRC53A6NM62 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.64■■□□□ 1.21
LRRC53A6NM62 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.64■■□□□ 1.21
LRRC53A6NM62 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.64■■□□□ 1.21
LRRC53A6NM62 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
LRRC53A6NM62 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LRRC53A6NM62 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
LRRC53A6NM62 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LRRC53A6NM62 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LRRC53A6NM62 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LRRC53A6NM62 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRRC53A6NM62 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LRRC53A6NM62 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
LRRC53A6NM62 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRRC53A6NM62 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRRC53A6NM62 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRRC53A6NM62 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRRC53A6NM62 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRRC53A6NM62 AC005224.4-201ENST00000583262 1652 ntBASIC22.63■■□□□ 1.21
LRRC53A6NM62 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
LRRC53A6NM62 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.63■■□□□ 1.21
LRRC53A6NM62 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRRC53A6NM62 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.63■■□□□ 1.21
LRRC53A6NM62 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.63■■□□□ 1.21
LRRC53A6NM62 PBX2P1-201ENST00000493219 1291 ntBASIC22.63■■□□□ 1.21
LRRC53A6NM62 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.63■■□□□ 1.21
LRRC53A6NM62 AC027682.1-201ENST00000562846 899 ntBASIC22.63■■□□□ 1.21
LRRC53A6NM62 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.63■■□□□ 1.21
LRRC53A6NM62 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.63■■□□□ 1.21
LRRC53A6NM62 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRRC53A6NM62 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.63■■□□□ 1.21
LRRC53A6NM62 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRRC53A6NM62 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRRC53A6NM62 AC008406.3-201ENST00000620001 1374 ntBASIC22.63■■□□□ 1.21
LRRC53A6NM62 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LRRC53A6NM62 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
LRRC53A6NM62 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
LRRC53A6NM62 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LRRC53A6NM62 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
LRRC53A6NM62 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
LRRC53A6NM62 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
LRRC53A6NM62 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.62■■□□□ 1.21
LRRC53A6NM62 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.62■■□□□ 1.21
LRRC53A6NM62 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.62■■□□□ 1.21
LRRC53A6NM62 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.62■■□□□ 1.21
LRRC53A6NM62 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRRC53A6NM62 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.62■■□□□ 1.21
LRRC53A6NM62 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.62■■□□□ 1.21
LRRC53A6NM62 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
LRRC53A6NM62 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRRC53A6NM62 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
LRRC53A6NM62 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRRC53A6NM62 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRRC53A6NM62 AC006128.1-201ENST00000624704 1661 ntBASIC22.62■■□□□ 1.21
LRRC53A6NM62 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LRRC53A6NM62 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LRRC53A6NM62 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LRRC53A6NM62 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.61■■□□□ 1.21
LRRC53A6NM62 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.61■■□□□ 1.21
LRRC53A6NM62 AP001330.3-201ENST00000520123 633 ntBASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms