Protein–RNA interactions for Protein: A6NHP3

SPDYE2B, Speedy protein E2B, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE2BA6NHP3 KRT17P1-201ENST00000399211 1546 ntBASIC25.12■■□□□ 1.61
SPDYE2BA6NHP3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SPDYE2BA6NHP3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
SPDYE2BA6NHP3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC25.12■■□□□ 1.61
SPDYE2BA6NHP3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SPDYE2BA6NHP3 AP006294.2-201ENST00000641667 209 ntBASIC25.12■■□□□ 1.61
SPDYE2BA6NHP3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
SPDYE2BA6NHP3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SPDYE2BA6NHP3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SPDYE2BA6NHP3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.12■■□□□ 1.61
SPDYE2BA6NHP3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC25.11■■□□□ 1.61
SPDYE2BA6NHP3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
SPDYE2BA6NHP3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC25.11■■□□□ 1.61
SPDYE2BA6NHP3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC25.11■■□□□ 1.61
SPDYE2BA6NHP3 AL158047.1-201ENST00000445918 881 ntBASIC25.11■■□□□ 1.61
SPDYE2BA6NHP3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC25.11■■□□□ 1.61
SPDYE2BA6NHP3 FAM21FP-204ENST00000608637 956 ntBASIC25.11■■□□□ 1.61
SPDYE2BA6NHP3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC25.11■■□□□ 1.61
SPDYE2BA6NHP3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.11■■□□□ 1.61
SPDYE2BA6NHP3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.1■■□□□ 1.61
SPDYE2BA6NHP3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPDYE2BA6NHP3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPDYE2BA6NHP3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SPDYE2BA6NHP3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPDYE2BA6NHP3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.1■■□□□ 1.61
SPDYE2BA6NHP3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPDYE2BA6NHP3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPDYE2BA6NHP3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPDYE2BA6NHP3 AL355472.2-201ENST00000422958 438 ntBASIC25.1■■□□□ 1.61
SPDYE2BA6NHP3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC25.1■■□□□ 1.61
SPDYE2BA6NHP3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC25.1■■□□□ 1.61
SPDYE2BA6NHP3 AC142381.4-202ENST00000563973 229 ntBASIC25.1■■□□□ 1.61
SPDYE2BA6NHP3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPDYE2BA6NHP3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.09■■□□□ 1.61
SPDYE2BA6NHP3 AC092053.2-201ENST00000640557 1818 ntBASIC25.09■■□□□ 1.61
SPDYE2BA6NHP3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE2BA6NHP3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE2BA6NHP3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE2BA6NHP3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC25.09■■□□□ 1.61
SPDYE2BA6NHP3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC25.09■■□□□ 1.61
SPDYE2BA6NHP3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC25.09■■□□□ 1.61
SPDYE2BA6NHP3 AP003097.1-201ENST00000530657 1135 ntBASIC25.09■■□□□ 1.61
SPDYE2BA6NHP3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC25.09■■□□□ 1.61
SPDYE2BA6NHP3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE2BA6NHP3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE2BA6NHP3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SPDYE2BA6NHP3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SPDYE2BA6NHP3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC25.08■■□□□ 1.61
SPDYE2BA6NHP3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC25.08■■□□□ 1.61
SPDYE2BA6NHP3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
SPDYE2BA6NHP3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC25.08■■□□□ 1.61
SPDYE2BA6NHP3 AC073648.6-201ENST00000641589 218 ntBASIC25.08■■□□□ 1.61
SPDYE2BA6NHP3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
SPDYE2BA6NHP3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SPDYE2BA6NHP3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.08■■□□□ 1.6
SPDYE2BA6NHP3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
SPDYE2BA6NHP3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SPDYE2BA6NHP3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SPDYE2BA6NHP3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SPDYE2BA6NHP3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SPDYE2BA6NHP3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC25.07■■□□□ 1.6
SPDYE2BA6NHP3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SPDYE2BA6NHP3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SPDYE2BA6NHP3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC25.07■■□□□ 1.6
SPDYE2BA6NHP3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC25.07■■□□□ 1.6
SPDYE2BA6NHP3 AC100791.3-201ENST00000617619 330 ntBASIC25.07■■□□□ 1.6
SPDYE2BA6NHP3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.07■■□□□ 1.6
SPDYE2BA6NHP3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC25.07■■□□□ 1.6
SPDYE2BA6NHP3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC25.07■■□□□ 1.6
SPDYE2BA6NHP3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
SPDYE2BA6NHP3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
SPDYE2BA6NHP3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SPDYE2BA6NHP3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SPDYE2BA6NHP3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC25.06■■□□□ 1.6
SPDYE2BA6NHP3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
SPDYE2BA6NHP3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC25.06■■□□□ 1.6
SPDYE2BA6NHP3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
SPDYE2BA6NHP3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC25.06■■□□□ 1.6
SPDYE2BA6NHP3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC25.06■■□□□ 1.6
SPDYE2BA6NHP3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC25.06■■□□□ 1.6
SPDYE2BA6NHP3 CYP2T3P-201ENST00000601990 817 ntBASIC25.06■■□□□ 1.6
SPDYE2BA6NHP3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
SPDYE2BA6NHP3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SPDYE2BA6NHP3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.05■■□□□ 1.6
SPDYE2BA6NHP3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE2BA6NHP3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE2BA6NHP3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE2BA6NHP3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE2BA6NHP3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC25.05■■□□□ 1.6
SPDYE2BA6NHP3 NME6-213ENST00000451657 871 ntTSL 2 BASIC25.05■■□□□ 1.6
SPDYE2BA6NHP3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.05■■□□□ 1.6
SPDYE2BA6NHP3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
SPDYE2BA6NHP3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC25.05■■□□□ 1.6
SPDYE2BA6NHP3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC25.05■■□□□ 1.6
SPDYE2BA6NHP3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
SPDYE2BA6NHP3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE2BA6NHP3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
SPDYE2BA6NHP3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SPDYE2BA6NHP3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
SPDYE2BA6NHP3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms