Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 AC003102.1-202ENST00000563394 1796 ntBASIC32.7■■■□□ 2.83
PLEKHD1A6NEE1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
PLEKHD1A6NEE1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
PLEKHD1A6NEE1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
PLEKHD1A6NEE1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC32.7■■■□□ 2.83
PLEKHD1A6NEE1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC32.7■■■□□ 2.83
PLEKHD1A6NEE1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC32.7■■■□□ 2.83
PLEKHD1A6NEE1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC32.7■■■□□ 2.83
PLEKHD1A6NEE1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
PLEKHD1A6NEE1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC32.7■■■□□ 2.82
PLEKHD1A6NEE1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
PLEKHD1A6NEE1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC32.69■■■□□ 2.82
PLEKHD1A6NEE1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
PLEKHD1A6NEE1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC32.69■■■□□ 2.82
PLEKHD1A6NEE1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
PLEKHD1A6NEE1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
PLEKHD1A6NEE1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
PLEKHD1A6NEE1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC32.68■■■□□ 2.82
PLEKHD1A6NEE1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC32.68■■■□□ 2.82
PLEKHD1A6NEE1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
PLEKHD1A6NEE1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
PLEKHD1A6NEE1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
PLEKHD1A6NEE1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
PLEKHD1A6NEE1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
PLEKHD1A6NEE1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC32.67■■■□□ 2.82
PLEKHD1A6NEE1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC32.67■■■□□ 2.82
PLEKHD1A6NEE1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
PLEKHD1A6NEE1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
PLEKHD1A6NEE1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC32.67■■■□□ 2.82
PLEKHD1A6NEE1 RPPH1-201ENST00000516869 333 ntBASIC32.67■■■□□ 2.82
PLEKHD1A6NEE1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC32.67■■■□□ 2.82
PLEKHD1A6NEE1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
PLEKHD1A6NEE1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
PLEKHD1A6NEE1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
PLEKHD1A6NEE1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC32.66■■■□□ 2.82
PLEKHD1A6NEE1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
PLEKHD1A6NEE1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC32.66■■■□□ 2.82
PLEKHD1A6NEE1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC32.66■■■□□ 2.82
PLEKHD1A6NEE1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC32.66■■■□□ 2.82
PLEKHD1A6NEE1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC32.66■■■□□ 2.82
PLEKHD1A6NEE1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC32.66■■■□□ 2.82
PLEKHD1A6NEE1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
PLEKHD1A6NEE1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
PLEKHD1A6NEE1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
PLEKHD1A6NEE1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
PLEKHD1A6NEE1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
PLEKHD1A6NEE1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
PLEKHD1A6NEE1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC32.65■■■□□ 2.82
PLEKHD1A6NEE1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC32.65■■■□□ 2.82
PLEKHD1A6NEE1 CDV3P1-201ENST00000471403 739 ntBASIC32.65■■■□□ 2.82
PLEKHD1A6NEE1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC32.65■■■□□ 2.82
PLEKHD1A6NEE1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC32.65■■■□□ 2.82
PLEKHD1A6NEE1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
PLEKHD1A6NEE1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
PLEKHD1A6NEE1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC32.64■■■□□ 2.82
PLEKHD1A6NEE1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC32.64■■■□□ 2.82
PLEKHD1A6NEE1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC32.64■■■□□ 2.82
PLEKHD1A6NEE1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
PLEKHD1A6NEE1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC32.64■■■□□ 2.82
PLEKHD1A6NEE1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC32.64■■■□□ 2.82
PLEKHD1A6NEE1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC32.64■■■□□ 2.82
PLEKHD1A6NEE1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PLEKHD1A6NEE1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PLEKHD1A6NEE1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC32.63■■■□□ 2.81
PLEKHD1A6NEE1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PLEKHD1A6NEE1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PLEKHD1A6NEE1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
PLEKHD1A6NEE1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PLEKHD1A6NEE1 MIR718-201ENST00000390190 70 ntBASIC32.63■■■□□ 2.81
PLEKHD1A6NEE1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
PLEKHD1A6NEE1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
PLEKHD1A6NEE1 PNMA6B-201ENST00000538162 1200 ntBASIC32.63■■■□□ 2.81
PLEKHD1A6NEE1 AL589743.5-201ENST00000616611 1050 ntBASIC32.63■■■□□ 2.81
PLEKHD1A6NEE1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
PLEKHD1A6NEE1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
PLEKHD1A6NEE1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC32.62■■■□□ 2.81
PLEKHD1A6NEE1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
PLEKHD1A6NEE1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC32.62■■■□□ 2.81
PLEKHD1A6NEE1 C1QBPP2-201ENST00000528754 825 ntBASIC32.62■■■□□ 2.81
PLEKHD1A6NEE1 MIR4497-201ENST00000583208 89 ntBASIC32.62■■■□□ 2.81
PLEKHD1A6NEE1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
PLEKHD1A6NEE1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC32.62■■■□□ 2.81
PLEKHD1A6NEE1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC32.62■■■□□ 2.81
PLEKHD1A6NEE1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC32.62■■■□□ 2.81
PLEKHD1A6NEE1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC32.62■■■□□ 2.81
PLEKHD1A6NEE1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
PLEKHD1A6NEE1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC32.62■■■□□ 2.81
PLEKHD1A6NEE1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC32.62■■■□□ 2.81
PLEKHD1A6NEE1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
PLEKHD1A6NEE1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC32.61■■■□□ 2.81
PLEKHD1A6NEE1 MCRIP2P1-201ENST00000394346 511 ntBASIC32.61■■■□□ 2.81
PLEKHD1A6NEE1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC32.61■■■□□ 2.81
PLEKHD1A6NEE1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC32.61■■■□□ 2.81
PLEKHD1A6NEE1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC32.61■■■□□ 2.81
PLEKHD1A6NEE1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
PLEKHD1A6NEE1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC32.6■■■□□ 2.81
PLEKHD1A6NEE1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC32.6■■■□□ 2.81
PLEKHD1A6NEE1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
PLEKHD1A6NEE1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
PLEKHD1A6NEE1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC32.6■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms