Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 LINC01521-201ENST00000504184 1943 ntBASIC19.38■□□□□ 0.69
HTR3EA5X5Y0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.38■□□□□ 0.69
HTR3EA5X5Y0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HTR3EA5X5Y0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HTR3EA5X5Y0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HTR3EA5X5Y0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTR3EA5X5Y0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.38■□□□□ 0.69
HTR3EA5X5Y0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HTR3EA5X5Y0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HTR3EA5X5Y0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HTR3EA5X5Y0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HTR3EA5X5Y0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HTR3EA5X5Y0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HTR3EA5X5Y0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.37■□□□□ 0.69
HTR3EA5X5Y0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HTR3EA5X5Y0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HTR3EA5X5Y0 SLC47A1P1-202ENST00000449666 945 ntBASIC19.37■□□□□ 0.69
HTR3EA5X5Y0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.37■□□□□ 0.69
HTR3EA5X5Y0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HTR3EA5X5Y0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HTR3EA5X5Y0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
HTR3EA5X5Y0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HTR3EA5X5Y0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.36■□□□□ 0.69
HTR3EA5X5Y0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.36■□□□□ 0.69
HTR3EA5X5Y0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HTR3EA5X5Y0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
HTR3EA5X5Y0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
HTR3EA5X5Y0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HTR3EA5X5Y0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
HTR3EA5X5Y0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HTR3EA5X5Y0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
HTR3EA5X5Y0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.36■□□□□ 0.69
HTR3EA5X5Y0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.36■□□□□ 0.69
HTR3EA5X5Y0 BX842568.3-201ENST00000418104 571 ntBASIC19.36■□□□□ 0.69
HTR3EA5X5Y0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.36■□□□□ 0.69
HTR3EA5X5Y0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HTR3EA5X5Y0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
HTR3EA5X5Y0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 Z98882.1-201ENST00000622160 2253 ntBASIC19.34■□□□□ 0.69
HTR3EA5X5Y0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.33■□□□□ 0.69
HTR3EA5X5Y0 AP004607.7-201ENST00000527152 1677 ntBASIC19.33■□□□□ 0.69
HTR3EA5X5Y0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HTR3EA5X5Y0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
HTR3EA5X5Y0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HTR3EA5X5Y0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HTR3EA5X5Y0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HTR3EA5X5Y0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HTR3EA5X5Y0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.33■□□□□ 0.68
HTR3EA5X5Y0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.33■□□□□ 0.68
HTR3EA5X5Y0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.33■□□□□ 0.68
HTR3EA5X5Y0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HTR3EA5X5Y0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HTR3EA5X5Y0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HTR3EA5X5Y0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.33■□□□□ 0.68
HTR3EA5X5Y0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.33■□□□□ 0.68
HTR3EA5X5Y0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.33■□□□□ 0.68
HTR3EA5X5Y0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.33■□□□□ 0.68
HTR3EA5X5Y0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HTR3EA5X5Y0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
HTR3EA5X5Y0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms