Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC31.36■■■□□ 2.61
HFM1A2PYH4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC31.36■■■□□ 2.61
HFM1A2PYH4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC31.36■■■□□ 2.61
HFM1A2PYH4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
HFM1A2PYH4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
HFM1A2PYH4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
HFM1A2PYH4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC31.36■■■□□ 2.61
HFM1A2PYH4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
HFM1A2PYH4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
HFM1A2PYH4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
HFM1A2PYH4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC31.35■■■□□ 2.61
HFM1A2PYH4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC31.35■■■□□ 2.61
HFM1A2PYH4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC31.35■■■□□ 2.61
HFM1A2PYH4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC31.35■■■□□ 2.61
HFM1A2PYH4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC31.35■■■□□ 2.61
HFM1A2PYH4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
HFM1A2PYH4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC31.35■■■□□ 2.61
HFM1A2PYH4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
HFM1A2PYH4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
HFM1A2PYH4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
HFM1A2PYH4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
HFM1A2PYH4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC31.34■■■□□ 2.61
HFM1A2PYH4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC31.34■■■□□ 2.61
HFM1A2PYH4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC31.34■■■□□ 2.61
HFM1A2PYH4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC31.34■■■□□ 2.61
HFM1A2PYH4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
HFM1A2PYH4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC31.34■■■□□ 2.61
HFM1A2PYH4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC31.34■■■□□ 2.61
HFM1A2PYH4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
HFM1A2PYH4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC31.33■■■□□ 2.61
HFM1A2PYH4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC31.33■■■□□ 2.61
HFM1A2PYH4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC31.33■■■□□ 2.61
HFM1A2PYH4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
HFM1A2PYH4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC31.33■■■□□ 2.61
HFM1A2PYH4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
HFM1A2PYH4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
HFM1A2PYH4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC31.33■■■□□ 2.61
HFM1A2PYH4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
HFM1A2PYH4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.61
HFM1A2PYH4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC31.32■■■□□ 2.61
HFM1A2PYH4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
HFM1A2PYH4 AL162412.1-201ENST00000567129 965 ntBASIC31.32■■■□□ 2.61
HFM1A2PYH4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC31.32■■■□□ 2.61
HFM1A2PYH4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
HFM1A2PYH4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
HFM1A2PYH4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
HFM1A2PYH4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
HFM1A2PYH4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC31.32■■■□□ 2.6
HFM1A2PYH4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
HFM1A2PYH4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC31.32■■■□□ 2.6
HFM1A2PYH4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC31.32■■■□□ 2.6
HFM1A2PYH4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
HFM1A2PYH4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
HFM1A2PYH4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC31.31■■■□□ 2.6
HFM1A2PYH4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
HFM1A2PYH4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC31.31■■■□□ 2.6
HFM1A2PYH4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC31.31■■■□□ 2.6
HFM1A2PYH4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC31.31■■■□□ 2.6
HFM1A2PYH4 AC133552.2-202ENST00000575694 574 ntBASIC31.31■■■□□ 2.6
HFM1A2PYH4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC31.31■■■□□ 2.6
HFM1A2PYH4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
HFM1A2PYH4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC31.3■■■□□ 2.6
HFM1A2PYH4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
HFM1A2PYH4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC31.3■■■□□ 2.6
HFM1A2PYH4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
HFM1A2PYH4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
HFM1A2PYH4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
HFM1A2PYH4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
HFM1A2PYH4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
HFM1A2PYH4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC31.3■■■□□ 2.6
HFM1A2PYH4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
HFM1A2PYH4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC31.3■■■□□ 2.6
HFM1A2PYH4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC31.3■■■□□ 2.6
HFM1A2PYH4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
HFM1A2PYH4 AC091799.1-201ENST00000422823 811 ntBASIC31.29■■■□□ 2.6
HFM1A2PYH4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
HFM1A2PYH4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
HFM1A2PYH4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
HFM1A2PYH4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
HFM1A2PYH4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
HFM1A2PYH4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
HFM1A2PYH4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
HFM1A2PYH4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
HFM1A2PYH4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC31.27■■■□□ 2.6
HFM1A2PYH4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
HFM1A2PYH4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
HFM1A2PYH4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC31.27■■■□□ 2.6
HFM1A2PYH4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC31.27■■■□□ 2.6
HFM1A2PYH4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC31.27■■■□□ 2.6
HFM1A2PYH4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
HFM1A2PYH4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
HFM1A2PYH4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC31.27■■■□□ 2.6
HFM1A2PYH4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
HFM1A2PYH4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
HFM1A2PYH4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC31.26■■■□□ 2.6
HFM1A2PYH4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
HFM1A2PYH4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC31.26■■■□□ 2.6
HFM1A2PYH4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
HFM1A2PYH4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC31.26■■■□□ 2.6
HFM1A2PYH4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC31.26■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms