Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AC092437.1-201ENST00000624794 1048 ntBASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AC005229.4-201ENST00000610085 2198 ntBASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
TCRBV4S1A1TA0A5B7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV4S1A1TA0A5B7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.87■□□□□ 0.29
TCRBV4S1A1TA0A5B7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV4S1A1TA0A5B7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV4S1A1TA0A5B7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.87■□□□□ 0.29
TCRBV4S1A1TA0A5B7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.87■□□□□ 0.29
TCRBV4S1A1TA0A5B7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV4S1A1TA0A5B7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.87■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AC137761.2-201ENST00000561729 223 ntBASIC16.87■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AC145350.3-201ENST00000569033 163 ntBASIC16.87■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TCRBV4S1A1TA0A5B7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV4S1A1TA0A5B7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV4S1A1TA0A5B7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV4S1A1TA0A5B7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TCRBV4S1A1TA0A5B7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 Z98882.1-201ENST00000622160 2253 ntBASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TCRBV4S1A1TA0A5B7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV4S1A1TA0A5B7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV4S1A1TA0A5B7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV4S1A1TA0A5B7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV4S1A1TA0A5B7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRBV4S1A1TA0A5B7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.85■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.85■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AC079140.4-201ENST00000507448 529 ntBASIC16.85■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.85■□□□□ 0.29
TCRBV4S1A1TA0A5B7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV4S1A1TA0A5B7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV4S1A1TA0A5B7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV4S1A1TA0A5B7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
TCRBV4S1A1TA0A5B7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV4S1A1TA0A5B7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV4S1A1TA0A5B7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 AC079089.2-201ENST00000531211 1277 ntBASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV4S1A1TA0A5B7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV4S1A1TA0A5B7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TCRBV4S1A1TA0A5B7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV4S1A1TA0A5B7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TCRBV4S1A1TA0A5B7 KRT19P1-201ENST00000405746 1186 ntBASIC16.83■□□□□ 0.28
TCRBV4S1A1TA0A5B7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms