Protein–RNA interactions for Protein: A0A140TA62

LOC100653049, Uncharacterized protein, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC100653049A0A140TA62 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LOC100653049A0A140TA62 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.35■□□□□ 0.85
LOC100653049A0A140TA62 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.35■□□□□ 0.85
LOC100653049A0A140TA62 PLK5-205ENST00000642079 1969 ntBASIC20.35■□□□□ 0.85
LOC100653049A0A140TA62 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LOC100653049A0A140TA62 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LOC100653049A0A140TA62 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
LOC100653049A0A140TA62 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.35■□□□□ 0.85
LOC100653049A0A140TA62 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 Z92544.1-202ENST00000571933 1220 ntBASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.34■□□□□ 0.85
LOC100653049A0A140TA62 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 AC010997.5-201ENST00000609182 354 ntBASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 pRNA.6-201ENST00000610482 90 ntBASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 pRNA.5-201ENST00000612139 90 ntBASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 pRNA.11-201ENST00000618423 90 ntBASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 pRNA.13-201ENST00000619112 90 ntBASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
LOC100653049A0A140TA62 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.33■□□□□ 0.84
LOC100653049A0A140TA62 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LOC100653049A0A140TA62 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
LOC100653049A0A140TA62 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LOC100653049A0A140TA62 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 KRT125P-201ENST00000546827 989 ntBASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 AC241377.3-202ENST00000626088 1088 ntBASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 AC241585.3-202ENST00000628937 1088 ntBASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 AC245100.8-202ENST00000629247 1058 ntBASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC100653049A0A140TA62 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LOC100653049A0A140TA62 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.31■□□□□ 0.84
LOC100653049A0A140TA62 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC100653049A0A140TA62 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC100653049A0A140TA62 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC100653049A0A140TA62 AL117332.1-201ENST00000622628 974 ntBASIC20.31■□□□□ 0.84
LOC100653049A0A140TA62 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC100653049A0A140TA62 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
LOC100653049A0A140TA62 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC100653049A0A140TA62 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LOC100653049A0A140TA62 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
LOC100653049A0A140TA62 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC100653049A0A140TA62 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LOC100653049A0A140TA62 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
LOC100653049A0A140TA62 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LOC100653049A0A140TA62 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC100653049A0A140TA62 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.3■□□□□ 0.84
LOC100653049A0A140TA62 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LOC100653049A0A140TA62 AC068587.7-201ENST00000641602 218 ntBASIC20.3■□□□□ 0.84
LOC100653049A0A140TA62 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC100653049A0A140TA62 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LOC100653049A0A140TA62 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC100653049A0A140TA62 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms