Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCDC163A0A0D9SF12 FAM197Y4-202ENST00000622692 608 ntBASIC20.97■□□□□ 0.95
CCDC163A0A0D9SF12 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC163A0A0D9SF12 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC163A0A0D9SF12 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC163A0A0D9SF12 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC163A0A0D9SF12 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CCDC163A0A0D9SF12 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC163A0A0D9SF12 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC163A0A0D9SF12 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC163A0A0D9SF12 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC163A0A0D9SF12 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC163A0A0D9SF12 PNMA6B-201ENST00000538162 1200 ntBASIC20.96■□□□□ 0.95
CCDC163A0A0D9SF12 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC163A0A0D9SF12 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.96■□□□□ 0.95
CCDC163A0A0D9SF12 RN7SL471P-201ENST00000580476 299 ntBASIC20.96■□□□□ 0.95
CCDC163A0A0D9SF12 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC163A0A0D9SF12 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC163A0A0D9SF12 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC163A0A0D9SF12 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC163A0A0D9SF12 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC163A0A0D9SF12 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC163A0A0D9SF12 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC163A0A0D9SF12 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CCDC163A0A0D9SF12 MCRIP2P1-201ENST00000394346 511 ntBASIC20.95■□□□□ 0.94
CCDC163A0A0D9SF12 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CCDC163A0A0D9SF12 AL355472.2-201ENST00000422958 438 ntBASIC20.95■□□□□ 0.94
CCDC163A0A0D9SF12 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC163A0A0D9SF12 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC163A0A0D9SF12 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC163A0A0D9SF12 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.95■□□□□ 0.94
CCDC163A0A0D9SF12 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC163A0A0D9SF12 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC163A0A0D9SF12 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.95■□□□□ 0.94
CCDC163A0A0D9SF12 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC163A0A0D9SF12 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC163A0A0D9SF12 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC163A0A0D9SF12 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC163A0A0D9SF12 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC163A0A0D9SF12 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC163A0A0D9SF12 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 C1QBPP2-201ENST00000528754 825 ntBASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC163A0A0D9SF12 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC163A0A0D9SF12 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC163A0A0D9SF12 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC163A0A0D9SF12 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC163A0A0D9SF12 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC163A0A0D9SF12 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC163A0A0D9SF12 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC163A0A0D9SF12 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC163A0A0D9SF12 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC163A0A0D9SF12 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.93■□□□□ 0.94
CCDC163A0A0D9SF12 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC163A0A0D9SF12 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC163A0A0D9SF12 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC163A0A0D9SF12 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC163A0A0D9SF12 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC163A0A0D9SF12 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC163A0A0D9SF12 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CCDC163A0A0D9SF12 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC163A0A0D9SF12 AC245052.3-201ENST00000450182 901 ntBASIC20.92■□□□□ 0.94
CCDC163A0A0D9SF12 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC163A0A0D9SF12 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC163A0A0D9SF12 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC163A0A0D9SF12 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC163A0A0D9SF12 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC163A0A0D9SF12 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC163A0A0D9SF12 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC163A0A0D9SF12 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC163A0A0D9SF12 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC163A0A0D9SF12 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC163A0A0D9SF12 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC163A0A0D9SF12 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC163A0A0D9SF12 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
CCDC163A0A0D9SF12 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.91■□□□□ 0.94
CCDC163A0A0D9SF12 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC163A0A0D9SF12 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC163A0A0D9SF12 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC163A0A0D9SF12 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC163A0A0D9SF12 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC163A0A0D9SF12 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms