Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
TRAV17A0A0B4J275 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV17A0A0B4J275 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV17A0A0B4J275 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
TRAV17A0A0B4J275 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV17A0A0B4J275 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV17A0A0B4J275 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV17A0A0B4J275 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV17A0A0B4J275 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV17A0A0B4J275 CDV3P1-201ENST00000471403 739 ntBASIC19.09■□□□□ 0.65
TRAV17A0A0B4J275 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.09■□□□□ 0.65
TRAV17A0A0B4J275 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAV17A0A0B4J275 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV17A0A0B4J275 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.09■□□□□ 0.65
TRAV17A0A0B4J275 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.09■□□□□ 0.65
TRAV17A0A0B4J275 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV17A0A0B4J275 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV17A0A0B4J275 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV17A0A0B4J275 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV17A0A0B4J275 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.08■□□□□ 0.65
TRAV17A0A0B4J275 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV17A0A0B4J275 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV17A0A0B4J275 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV17A0A0B4J275 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV17A0A0B4J275 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TRAV17A0A0B4J275 LSM12P1-201ENST00000411836 588 ntBASIC19.08■□□□□ 0.64
TRAV17A0A0B4J275 DUSP5P2-201ENST00000426873 1033 ntBASIC19.08■□□□□ 0.64
TRAV17A0A0B4J275 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
TRAV17A0A0B4J275 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TRAV17A0A0B4J275 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.08■□□□□ 0.64
TRAV17A0A0B4J275 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
TRAV17A0A0B4J275 FAM21FP-204ENST00000608637 956 ntBASIC19.08■□□□□ 0.64
TRAV17A0A0B4J275 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV17A0A0B4J275 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.08■□□□□ 0.64
TRAV17A0A0B4J275 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.08■□□□□ 0.64
TRAV17A0A0B4J275 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV17A0A0B4J275 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TRAV17A0A0B4J275 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV17A0A0B4J275 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV17A0A0B4J275 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TRAV17A0A0B4J275 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV17A0A0B4J275 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV17A0A0B4J275 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.07■□□□□ 0.64
TRAV17A0A0B4J275 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV17A0A0B4J275 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV17A0A0B4J275 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.07■□□□□ 0.64
TRAV17A0A0B4J275 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV17A0A0B4J275 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.07■□□□□ 0.64
TRAV17A0A0B4J275 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV17A0A0B4J275 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV17A0A0B4J275 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV17A0A0B4J275 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV17A0A0B4J275 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TRAV17A0A0B4J275 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV17A0A0B4J275 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRAV17A0A0B4J275 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV17A0A0B4J275 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV17A0A0B4J275 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV17A0A0B4J275 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV17A0A0B4J275 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV17A0A0B4J275 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRAV17A0A0B4J275 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.06■□□□□ 0.64
TRAV17A0A0B4J275 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.06■□□□□ 0.64
TRAV17A0A0B4J275 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
TRAV17A0A0B4J275 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.06■□□□□ 0.64
TRAV17A0A0B4J275 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRAV17A0A0B4J275 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV17A0A0B4J275 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRAV17A0A0B4J275 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV17A0A0B4J275 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 AC091799.1-201ENST00000422823 811 ntBASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 AC008687.6-201ENST00000596318 630 ntBASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 AC100791.3-201ENST00000617619 330 ntBASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRAV17A0A0B4J275 AC080038.3-201ENST00000623346 1952 ntBASIC19.04■□□□□ 0.64
TRAV17A0A0B4J275 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAV17A0A0B4J275 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV17A0A0B4J275 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms