Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20■□□□□ 0.79
CCDC187A0A096LP49 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20■□□□□ 0.79
CCDC187A0A096LP49 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20■□□□□ 0.79
CCDC187A0A096LP49 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20■□□□□ 0.79
CCDC187A0A096LP49 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC187A0A096LP49 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC187A0A096LP49 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20■□□□□ 0.79
CCDC187A0A096LP49 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC187A0A096LP49 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC187A0A096LP49 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC187A0A096LP49 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC187A0A096LP49 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CCDC187A0A096LP49 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC187A0A096LP49 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC187A0A096LP49 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC187A0A096LP49 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC187A0A096LP49 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC187A0A096LP49 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC187A0A096LP49 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.98■□□□□ 0.79
CCDC187A0A096LP49 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.98■□□□□ 0.79
CCDC187A0A096LP49 FAM21FP-204ENST00000608637 956 ntBASIC19.98■□□□□ 0.79
CCDC187A0A096LP49 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC187A0A096LP49 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC187A0A096LP49 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC187A0A096LP49 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 RPS2P4-201ENST00000476944 856 ntBASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC187A0A096LP49 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 CDV3P1-201ENST00000471403 739 ntBASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 AC073648.6-201ENST00000641589 218 ntBASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC187A0A096LP49 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms