Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRBV20-1A0A075B6N2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV20-1A0A075B6N2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
TRBV20-1A0A075B6N2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.06□□□□□ -0.16
TRBV20-1A0A075B6N2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV20-1A0A075B6N2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV20-1A0A075B6N2 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.06□□□□□ -0.16
TRBV20-1A0A075B6N2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.06□□□□□ -0.16
TRBV20-1A0A075B6N2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV20-1A0A075B6N2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV20-1A0A075B6N2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV20-1A0A075B6N2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRBV20-1A0A075B6N2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV20-1A0A075B6N2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV20-1A0A075B6N2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRBV20-1A0A075B6N2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRBV20-1A0A075B6N2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV20-1A0A075B6N2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 AC116562.4-201ENST00000641316 2276 ntBASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV20-1A0A075B6N2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV20-1A0A075B6N2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 MIR762-201ENST00000390236 83 ntBASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 AC090877.2-201ENST00000558441 1738 ntBASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV20-1A0A075B6N2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.02□□□□□ -0.16
TRBV20-1A0A075B6N2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
TRBV20-1A0A075B6N2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.02□□□□□ -0.16
TRBV20-1A0A075B6N2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRBV20-1A0A075B6N2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms