Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 RNA5S7-201ENST00000365651 119 ntBASIC9.77□□□□□ -0.85
P04436 RNA5S13-201ENST00000365656 119 ntBASIC9.77□□□□□ -0.85
P04436 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04436 AL513475.2-201ENST00000402316 392 ntBASIC9.77□□□□□ -0.85
P04436 ZNF268-202ENST00000416488 897 ntTSL 4 BASIC9.77□□□□□ -0.85
P04436 FAM104B-203ENST00000425133 1229 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
P04436 AP001065.1-201ENST00000449713 912 ntTSL 3 BASIC9.77□□□□□ -0.85
P04436 AL161646.2-201ENST00000450054 369 ntTSL 3 BASIC9.77□□□□□ -0.85
P04436 AL356599.1-204ENST00000452617 938 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
P04436 AC245595.1-202ENST00000457390 425 ntTSL 5 BASIC9.77□□□□□ -0.85
P04436 RUVBL1-AS1-201ENST00000485218 588 ntTSL 4 BASIC9.77□□□□□ -0.85
P04436 AC008549.3-201ENST00000505098 404 ntBASIC9.77□□□□□ -0.85
P04436 AC113378.1-201ENST00000510964 445 ntTSL 3 BASIC9.77□□□□□ -0.85
P04436 ANP32C-201ENST00000512835 705 ntBASIC9.77□□□□□ -0.85
P04436 HNRNPA3P7-201ENST00000521638 982 ntBASIC9.77□□□□□ -0.85
P04436 AC018943.1-202ENST00000569137 399 ntTSL 2 BASIC9.77□□□□□ -0.85
P04436 RPL19-205ENST00000579374 690 ntAPPRIS ALT1 TSL 2 BASIC9.77□□□□□ -0.85
P04436 AC024592.2-201ENST00000589276 1188 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
P04436 ITGA9-AS1-211ENST00000594579 670 ntTSL 2 BASIC9.77□□□□□ -0.85
P04436 AC016727.1-202ENST00000603028 384 ntTSL 3 BASIC9.77□□□□□ -0.85
P04436 MRPL35-204ENST00000605125 833 ntTSL 2 BASIC9.77□□□□□ -0.85
P04436 AP001065.3-201ENST00000622854 646 ntBASIC9.77□□□□□ -0.85
P04436 NBDY-204ENST00000637096 896 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
P04436 CPNE4-209ENST00000512055 5431 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
P04436 RAD9B-205ENST00000409425 2727 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
P04436 NDST2-207ENST00000639645 2448 ntTSL 5 BASIC9.77□□□□□ -0.85
P04436 TUFT1-204ENST00000392712 2946 ntTSL 5 BASIC9.77□□□□□ -0.85
P04436 SRGAP2-217ENST00000624873 4705 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04436 PRKCA-AS1-203ENST00000584715 2113 ntTSL 2 BASIC9.77□□□□□ -0.85
P04436 LINC02554-201ENST00000426467 5052 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
P04436 NUPR1-201ENST00000324873 5491 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04436 LRRC37A2-203ENST00000576629 5669 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
P04436 DDX50P2-201ENST00000463545 2193 ntBASIC9.77□□□□□ -0.85
P04436 AC131888.1-201ENST00000625028 2168 ntBASIC9.77□□□□□ -0.85
P04436 ATXN7L3-202ENST00000454077 3523 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04436 AL160274.1-201ENST00000623623 1515 ntBASIC9.77□□□□□ -0.85
P04436 RFX5-215ENST00000452671 2355 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
P04436 P4HA1-202ENST00000307116 2727 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 P4HA1-203ENST00000373008 2727 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 SYBU-222ENST00000529175 2717 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 CAMKK2-216ENST00000545538 3797 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 THRB-206ENST00000416420 2571 ntAPPRIS P2 TSL 2 BASIC9.76□□□□□ -0.85
P04436 RNF141-202ENST00000528665 1374 ntTSL 2 BASIC9.76□□□□□ -0.85
P04436 MAP3K7-205ENST00000369332 4830 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 DAW1-201ENST00000309931 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 GLRA1-202ENST00000455880 1707 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 POLR1D-206ENST00000489647 1723 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 SRP72-201ENST00000342756 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 MROH7-206ENST00000421030 4329 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
P04436 STAG1-210ENST00000629124 4322 ntTSL 5 BASIC9.76□□□□□ -0.85
P04436 UGT1A10-201ENST00000344644 2408 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 IMMT-206ENST00000442664 2627 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 CELF1-203ENST00000361904 1580 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 UNC79-205ENST00000555664 8484 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
P04436 AL031663.3-201ENST00000617473 1794 ntTSL 2 BASIC9.76□□□□□ -0.85
P04436 MYBBP1A-202ENST00000381556 4104 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
P04436 AL512662.2-201ENST00000453174 1963 ntTSL 2 BASIC9.76□□□□□ -0.85
P04436 ETS2-202ENST00000360938 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 KRBA1-207ENST00000496259 3763 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 LRIT2-201ENST00000372113 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 OTUD6B-206ENST00000617869 3294 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 ARL14-201ENST00000320767 1294 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
P04436 STYXL1-202ENST00000340062 953 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 ALDOAP2-201ENST00000398050 1076 ntBASIC9.76□□□□□ -0.85
P04436 HNRNPA1P37-201ENST00000404243 969 ntBASIC9.76□□□□□ -0.85
P04436 MICD-202ENST00000413248 813 ntBASIC9.76□□□□□ -0.85
P04436 SNX31-202ENST00000428383 1265 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 GAPDHP54-201ENST00000432657 893 ntBASIC9.76□□□□□ -0.85
P04436 ZNF823-203ENST00000440527 550 ntTSL 2 BASIC9.76□□□□□ -0.85
P04436 ZFYVE9P2-201ENST00000447321 604 ntBASIC9.76□□□□□ -0.85
P04436 AC002401.1-201ENST00000451776 468 ntTSL 3 BASIC9.76□□□□□ -0.85
P04436 RPL12P35-201ENST00000477007 496 ntBASIC9.76□□□□□ -0.85
P04436 AL442663.1-201ENST00000478589 364 ntBASIC9.76□□□□□ -0.85
P04436 SNRPG-208ENST00000482975 1093 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 AC105206.2-201ENST00000523556 515 ntTSL 2 BASIC9.76□□□□□ -0.85
P04436 Metazoa_SRP.26-201ENST00000547793 284 ntBASIC9.76□□□□□ -0.85
P04436 AC092720.1-201ENST00000562466 447 ntTSL 5 BASIC9.76□□□□□ -0.85
P04436 AC007342.3-201ENST00000565598 1218 ntBASIC9.76□□□□□ -0.85
P04436 U91319.1-201ENST00000571619 764 ntTSL 3 BASIC9.76□□□□□ -0.85
P04436 OR52L2P-201ENST00000572217 960 ntBASIC9.76□□□□□ -0.85
P04436 AC115989.1-201ENST00000574288 491 ntBASIC9.76□□□□□ -0.85
P04436 AC024075.1-201ENST00000596816 546 ntTSL 4 BASIC9.76□□□□□ -0.85
P04436 AC117498.3-201ENST00000605409 511 ntBASIC9.76□□□□□ -0.85
P04436 AP000322.2-201ENST00000608289 510 ntBASIC9.76□□□□□ -0.85
P04436 LYZL6-201ENST00000615905 1047 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
P04436 AC012676.4-201ENST00000616838 582 ntBASIC9.76□□□□□ -0.85
P04436 uc_338.24-201ENST00000617802 182 ntBASIC9.76□□□□□ -0.85
P04436 AL022326.2-201ENST00000623458 406 ntBASIC9.76□□□□□ -0.85
P04436 GLOD4-218ENST00000625892 111 ntTSL 5 BASIC9.76□□□□□ -0.85
P04436 GLOD4-219ENST00000628529 111 ntTSL 5 BASIC9.76□□□□□ -0.85
P04436 HS6ST2-206ENST00000640529 831 ntTSL 5 BASIC9.76□□□□□ -0.85
P04436 TRIM26-268ENST00000454678 3478 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 STAT6-205ENST00000543873 3119 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
P04436 TKTL1-201ENST00000369912 2566 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 ZWINT-201ENST00000318387 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 GRPEL2-201ENST00000329271 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 ALDH1A2-207ENST00000558231 1664 ntTSL 2 BASIC9.76□□□□□ -0.85
P04436 FLII-222ENST00000579294 3936 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
P04436 USP54-201ENST00000339859 6247 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
P04436 COPS4-206ENST00000509093 2273 ntTSL 2 BASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms