Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
HS3ST4Q9Y661 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
HS3ST4Q9Y661 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HS3ST4Q9Y661 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
HS3ST4Q9Y661 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HS3ST4Q9Y661 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.78■■□□□ 1.08
HS3ST4Q9Y661 SLC7A5P2-201ENST00000553010 536 ntBASIC21.78■■□□□ 1.08
HS3ST4Q9Y661 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.78■■□□□ 1.08
HS3ST4Q9Y661 UBE2DNL-204ENST00000602536 740 ntBASIC21.78■■□□□ 1.08
HS3ST4Q9Y661 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.78■■□□□ 1.08
HS3ST4Q9Y661 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HS3ST4Q9Y661 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HS3ST4Q9Y661 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.78■■□□□ 1.08
HS3ST4Q9Y661 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HS3ST4Q9Y661 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HS3ST4Q9Y661 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
HS3ST4Q9Y661 AC244015.2-201ENST00000616358 1861 ntBASIC21.77■■□□□ 1.08
HS3ST4Q9Y661 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HS3ST4Q9Y661 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.77■■□□□ 1.08
HS3ST4Q9Y661 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
HS3ST4Q9Y661 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
HS3ST4Q9Y661 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HS3ST4Q9Y661 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HS3ST4Q9Y661 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
HS3ST4Q9Y661 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.77■■□□□ 1.08
HS3ST4Q9Y661 KRT18P20-201ENST00000548986 1279 ntBASIC21.77■■□□□ 1.08
HS3ST4Q9Y661 AC008175.2-201ENST00000612840 297 ntBASIC21.77■■□□□ 1.08
HS3ST4Q9Y661 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HS3ST4Q9Y661 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
HS3ST4Q9Y661 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 AL137784.2-201ENST00000607332 1000 ntBASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HS3ST4Q9Y661 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 POU5F1P4-201ENST00000413175 1085 ntBASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 AC004911.1-201ENST00000416316 871 ntBASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HS3ST4Q9Y661 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
HS3ST4Q9Y661 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HS3ST4Q9Y661 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HS3ST4Q9Y661 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.74■■□□□ 1.07
HS3ST4Q9Y661 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.74■■□□□ 1.07
HS3ST4Q9Y661 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.74■■□□□ 1.07
HS3ST4Q9Y661 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.74■■□□□ 1.07
HS3ST4Q9Y661 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.74■■□□□ 1.07
HS3ST4Q9Y661 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
HS3ST4Q9Y661 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HS3ST4Q9Y661 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
HS3ST4Q9Y661 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HS3ST4Q9Y661 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.73■■□□□ 1.07
HS3ST4Q9Y661 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HS3ST4Q9Y661 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HS3ST4Q9Y661 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HS3ST4Q9Y661 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HS3ST4Q9Y661 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
HS3ST4Q9Y661 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
HS3ST4Q9Y661 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.73■■□□□ 1.07
HS3ST4Q9Y661 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
HS3ST4Q9Y661 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.73■■□□□ 1.07
HS3ST4Q9Y661 KRT18P11-201ENST00000435214 1283 ntBASIC21.73■■□□□ 1.07
HS3ST4Q9Y661 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.73■■□□□ 1.07
HS3ST4Q9Y661 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.73■■□□□ 1.07
HS3ST4Q9Y661 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.73■■□□□ 1.07
HS3ST4Q9Y661 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.73■■□□□ 1.07
HS3ST4Q9Y661 MYCNOS-205ENST00000641950 531 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms