Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHA9Q9Y5H5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHA9Q9Y5H5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PCDHA9Q9Y5H5 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHA9Q9Y5H5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHA9Q9Y5H5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHA9Q9Y5H5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.27■□□□□ 0.84
PCDHA9Q9Y5H5 MIR572-201ENST00000384983 95 ntBASIC20.27■□□□□ 0.84
PCDHA9Q9Y5H5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHA9Q9Y5H5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
PCDHA9Q9Y5H5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHA9Q9Y5H5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHA9Q9Y5H5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHA9Q9Y5H5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHA9Q9Y5H5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHA9Q9Y5H5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHA9Q9Y5H5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
PCDHA9Q9Y5H5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHA9Q9Y5H5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.27■□□□□ 0.83
PCDHA9Q9Y5H5 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHA9Q9Y5H5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA9Q9Y5H5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA9Q9Y5H5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA9Q9Y5H5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PCDHA9Q9Y5H5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PCDHA9Q9Y5H5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHA9Q9Y5H5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA9Q9Y5H5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PCDHA9Q9Y5H5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHA9Q9Y5H5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHA9Q9Y5H5 AC105233.4-201ENST00000642045 216 ntBASIC20.26■□□□□ 0.83
PCDHA9Q9Y5H5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA9Q9Y5H5 PKD1P6-201ENST00000343738 4769 ntBASIC20.26■□□□□ 0.83
PCDHA9Q9Y5H5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA9Q9Y5H5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA9Q9Y5H5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA9Q9Y5H5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHA9Q9Y5H5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
PCDHA9Q9Y5H5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
PCDHA9Q9Y5H5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHA9Q9Y5H5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHA9Q9Y5H5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHA9Q9Y5H5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHA9Q9Y5H5 MIR638-201ENST00000385237 100 ntBASIC20.25■□□□□ 0.83
PCDHA9Q9Y5H5 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHA9Q9Y5H5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDHA9Q9Y5H5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHA9Q9Y5H5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHA9Q9Y5H5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHA9Q9Y5H5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHA9Q9Y5H5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.25■□□□□ 0.83
PCDHA9Q9Y5H5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHA9Q9Y5H5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHA9Q9Y5H5 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHA9Q9Y5H5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHA9Q9Y5H5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHA9Q9Y5H5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHA9Q9Y5H5 LINC01006-201ENST00000333319 2292 ntBASIC20.24■□□□□ 0.83
PCDHA9Q9Y5H5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHA9Q9Y5H5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHA9Q9Y5H5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
PCDHA9Q9Y5H5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHA9Q9Y5H5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHA9Q9Y5H5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDHA9Q9Y5H5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHA9Q9Y5H5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHA9Q9Y5H5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHA9Q9Y5H5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCDHA9Q9Y5H5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHA9Q9Y5H5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHA9Q9Y5H5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHA9Q9Y5H5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHA9Q9Y5H5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHA9Q9Y5H5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHA9Q9Y5H5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHA9Q9Y5H5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHA9Q9Y5H5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHA9Q9Y5H5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHA9Q9Y5H5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHA9Q9Y5H5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHA9Q9Y5H5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDHA9Q9Y5H5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.23■□□□□ 0.83
PCDHA9Q9Y5H5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDHA9Q9Y5H5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHA9Q9Y5H5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHA9Q9Y5H5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHA9Q9Y5H5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PCDHA9Q9Y5H5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCDHA9Q9Y5H5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA9Q9Y5H5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHA9Q9Y5H5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA9Q9Y5H5 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHA9Q9Y5H5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHA9Q9Y5H5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHA9Q9Y5H5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA9Q9Y5H5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA9Q9Y5H5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHA9Q9Y5H5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHA9Q9Y5H5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHA9Q9Y5H5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms