Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC42Q9Y546 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.9■□□□□ 0.78
LRRC42Q9Y546 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LRRC42Q9Y546 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LRRC42Q9Y546 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
LRRC42Q9Y546 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.89■□□□□ 0.78
LRRC42Q9Y546 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
LRRC42Q9Y546 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC42Q9Y546 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC42Q9Y546 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC42Q9Y546 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC42Q9Y546 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC42Q9Y546 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.89■□□□□ 0.77
LRRC42Q9Y546 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LRRC42Q9Y546 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.89■□□□□ 0.77
LRRC42Q9Y546 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
LRRC42Q9Y546 LINC01529-204ENST00000636474 1715 ntBASIC19.89■□□□□ 0.77
LRRC42Q9Y546 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
LRRC42Q9Y546 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC42Q9Y546 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
LRRC42Q9Y546 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC42Q9Y546 AC099778.1-201ENST00000568593 1911 ntBASIC19.88■□□□□ 0.77
LRRC42Q9Y546 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC42Q9Y546 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC42Q9Y546 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.88■□□□□ 0.77
LRRC42Q9Y546 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC42Q9Y546 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC42Q9Y546 AC007029.1-201ENST00000604183 313 ntBASIC19.88■□□□□ 0.77
LRRC42Q9Y546 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC42Q9Y546 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC42Q9Y546 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LRRC42Q9Y546 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.88■□□□□ 0.77
LRRC42Q9Y546 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC42Q9Y546 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
LRRC42Q9Y546 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC42Q9Y546 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC42Q9Y546 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC42Q9Y546 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC42Q9Y546 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC42Q9Y546 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
LRRC42Q9Y546 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC42Q9Y546 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.87■□□□□ 0.77
LRRC42Q9Y546 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC42Q9Y546 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC42Q9Y546 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC42Q9Y546 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LRRC42Q9Y546 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LRRC42Q9Y546 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.87■□□□□ 0.77
LRRC42Q9Y546 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC42Q9Y546 AL512408.1-201ENST00000569378 2000 ntBASIC19.86■□□□□ 0.77
LRRC42Q9Y546 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC42Q9Y546 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC42Q9Y546 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
LRRC42Q9Y546 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC42Q9Y546 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LRRC42Q9Y546 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC42Q9Y546 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC42Q9Y546 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
LRRC42Q9Y546 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC42Q9Y546 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
LRRC42Q9Y546 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC42Q9Y546 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC42Q9Y546 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRRC42Q9Y546 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 RPS2P7-201ENST00000447334 885 ntBASIC19.85■□□□□ 0.77
LRRC42Q9Y546 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRRC42Q9Y546 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC42Q9Y546 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.84■□□□□ 0.77
LRRC42Q9Y546 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC42Q9Y546 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LRRC42Q9Y546 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.84■□□□□ 0.77
LRRC42Q9Y546 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
LRRC42Q9Y546 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LRRC42Q9Y546 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
LRRC42Q9Y546 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC42Q9Y546 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC42Q9Y546 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.84■□□□□ 0.77
LRRC42Q9Y546 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC42Q9Y546 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRRC42Q9Y546 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRRC42Q9Y546 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms