Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RTCBQ9Y3I0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
RTCBQ9Y3I0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
RTCBQ9Y3I0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC26.84■■□□□ 1.89
RTCBQ9Y3I0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
RTCBQ9Y3I0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC26.84■■□□□ 1.89
RTCBQ9Y3I0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.84■■□□□ 1.89
RTCBQ9Y3I0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC26.84■■□□□ 1.89
RTCBQ9Y3I0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
RTCBQ9Y3I0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.84■■□□□ 1.89
RTCBQ9Y3I0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC26.83■■□□□ 1.89
RTCBQ9Y3I0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.83■■□□□ 1.89
RTCBQ9Y3I0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RTCBQ9Y3I0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
RTCBQ9Y3I0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RTCBQ9Y3I0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RTCBQ9Y3I0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
RTCBQ9Y3I0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC26.83■■□□□ 1.89
RTCBQ9Y3I0 AC060766.5-201ENST00000590539 871 ntBASIC26.83■■□□□ 1.89
RTCBQ9Y3I0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.83■■□□□ 1.89
RTCBQ9Y3I0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RTCBQ9Y3I0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC26.83■■□□□ 1.88
RTCBQ9Y3I0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
RTCBQ9Y3I0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
RTCBQ9Y3I0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC26.82■■□□□ 1.88
RTCBQ9Y3I0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
RTCBQ9Y3I0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC26.82■■□□□ 1.88
RTCBQ9Y3I0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
RTCBQ9Y3I0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC26.82■■□□□ 1.88
RTCBQ9Y3I0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC26.82■■□□□ 1.88
RTCBQ9Y3I0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC26.82■■□□□ 1.88
RTCBQ9Y3I0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.82■■□□□ 1.88
RTCBQ9Y3I0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.81■■□□□ 1.88
RTCBQ9Y3I0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RTCBQ9Y3I0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
RTCBQ9Y3I0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RTCBQ9Y3I0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC26.81■■□□□ 1.88
RTCBQ9Y3I0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC26.81■■□□□ 1.88
RTCBQ9Y3I0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC26.81■■□□□ 1.88
RTCBQ9Y3I0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
RTCBQ9Y3I0 HLA-B-256ENST00000639848 1089 ntBASIC26.81■■□□□ 1.88
RTCBQ9Y3I0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RTCBQ9Y3I0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RTCBQ9Y3I0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RTCBQ9Y3I0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RTCBQ9Y3I0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RTCBQ9Y3I0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RTCBQ9Y3I0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC26.81■■□□□ 1.88
RTCBQ9Y3I0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
RTCBQ9Y3I0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
RTCBQ9Y3I0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC26.8■■□□□ 1.88
RTCBQ9Y3I0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
RTCBQ9Y3I0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC26.8■■□□□ 1.88
RTCBQ9Y3I0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
RTCBQ9Y3I0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
RTCBQ9Y3I0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.79■■□□□ 1.88
RTCBQ9Y3I0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
RTCBQ9Y3I0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
RTCBQ9Y3I0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RTCBQ9Y3I0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
RTCBQ9Y3I0 MIR718-201ENST00000390190 70 ntBASIC26.79■■□□□ 1.88
RTCBQ9Y3I0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
RTCBQ9Y3I0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC26.79■■□□□ 1.88
RTCBQ9Y3I0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
RTCBQ9Y3I0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC26.79■■□□□ 1.88
RTCBQ9Y3I0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC26.79■■□□□ 1.88
RTCBQ9Y3I0 CYP2T3P-201ENST00000601990 817 ntBASIC26.79■■□□□ 1.88
RTCBQ9Y3I0 FAM21FP-204ENST00000608637 956 ntBASIC26.79■■□□□ 1.88
RTCBQ9Y3I0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
RTCBQ9Y3I0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
RTCBQ9Y3I0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC26.78■■□□□ 1.88
RTCBQ9Y3I0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC26.78■■□□□ 1.88
RTCBQ9Y3I0 AC100791.3-201ENST00000617619 330 ntBASIC26.78■■□□□ 1.88
RTCBQ9Y3I0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
RTCBQ9Y3I0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
RTCBQ9Y3I0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
RTCBQ9Y3I0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RTCBQ9Y3I0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RTCBQ9Y3I0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
RTCBQ9Y3I0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
RTCBQ9Y3I0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC26.77■■□□□ 1.88
RTCBQ9Y3I0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
RTCBQ9Y3I0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RTCBQ9Y3I0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RTCBQ9Y3I0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RTCBQ9Y3I0 AC087742.1-201ENST00000575880 1738 ntBASIC26.77■■□□□ 1.88
RTCBQ9Y3I0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC26.77■■□□□ 1.88
RTCBQ9Y3I0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RTCBQ9Y3I0 RPPH1-201ENST00000516869 333 ntBASIC26.77■■□□□ 1.88
RTCBQ9Y3I0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC26.77■■□□□ 1.88
RTCBQ9Y3I0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RTCBQ9Y3I0 FAM197Y4-202ENST00000622692 608 ntBASIC26.77■■□□□ 1.88
RTCBQ9Y3I0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RTCBQ9Y3I0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC26.76■■□□□ 1.88
RTCBQ9Y3I0 AC091799.1-201ENST00000422823 811 ntBASIC26.76■■□□□ 1.87
RTCBQ9Y3I0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC26.76■■□□□ 1.87
RTCBQ9Y3I0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC26.76■■□□□ 1.87
RTCBQ9Y3I0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RTCBQ9Y3I0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RTCBQ9Y3I0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms