Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.65□□□□□ -0.06
UBE2D4Q9Y2X8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 UNC93B8-201ENST00000511903 705 ntBASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 AP005212.1-201ENST00000581547 1997 ntBASIC14.64□□□□□ -0.07
UBE2D4Q9Y2X8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.63□□□□□ -0.07
UBE2D4Q9Y2X8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBE2D4Q9Y2X8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
UBE2D4Q9Y2X8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBE2D4Q9Y2X8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC14.63□□□□□ -0.07
UBE2D4Q9Y2X8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBE2D4Q9Y2X8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBE2D4Q9Y2X8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBE2D4Q9Y2X8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
UBE2D4Q9Y2X8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBE2D4Q9Y2X8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBE2D4Q9Y2X8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBE2D4Q9Y2X8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBE2D4Q9Y2X8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBE2D4Q9Y2X8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 AC009299.2-201ENST00000482477 511 ntBASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBE2D4Q9Y2X8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC14.61□□□□□ -0.07
UBE2D4Q9Y2X8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms