Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF6Q9Y252 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF6Q9Y252 FP325331.1-202ENST00000623531 1380 ntBASIC19.78■□□□□ 0.76
RNF6Q9Y252 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF6Q9Y252 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF6Q9Y252 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF6Q9Y252 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF6Q9Y252 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF6Q9Y252 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF6Q9Y252 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RNF6Q9Y252 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF6Q9Y252 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF6Q9Y252 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF6Q9Y252 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF6Q9Y252 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF6Q9Y252 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF6Q9Y252 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.77■□□□□ 0.76
RNF6Q9Y252 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RNF6Q9Y252 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF6Q9Y252 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.77■□□□□ 0.75
RNF6Q9Y252 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RNF6Q9Y252 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
RNF6Q9Y252 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF6Q9Y252 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF6Q9Y252 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RNF6Q9Y252 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF6Q9Y252 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF6Q9Y252 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF6Q9Y252 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF6Q9Y252 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RNF6Q9Y252 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF6Q9Y252 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF6Q9Y252 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RNF6Q9Y252 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF6Q9Y252 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF6Q9Y252 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF6Q9Y252 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF6Q9Y252 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF6Q9Y252 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF6Q9Y252 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF6Q9Y252 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
RNF6Q9Y252 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF6Q9Y252 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF6Q9Y252 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF6Q9Y252 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF6Q9Y252 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF6Q9Y252 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RNF6Q9Y252 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF6Q9Y252 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF6Q9Y252 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF6Q9Y252 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF6Q9Y252 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF6Q9Y252 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF6Q9Y252 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RNF6Q9Y252 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF6Q9Y252 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF6Q9Y252 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RNF6Q9Y252 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RNF6Q9Y252 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.75■□□□□ 0.75
RNF6Q9Y252 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF6Q9Y252 OR2I1P-207ENST00000453522 948 ntBASIC19.75■□□□□ 0.75
RNF6Q9Y252 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF6Q9Y252 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF6Q9Y252 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF6Q9Y252 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF6Q9Y252 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF6Q9Y252 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF6Q9Y252 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF6Q9Y252 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF6Q9Y252 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF6Q9Y252 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF6Q9Y252 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF6Q9Y252 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF6Q9Y252 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF6Q9Y252 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF6Q9Y252 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF6Q9Y252 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF6Q9Y252 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF6Q9Y252 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF6Q9Y252 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF6Q9Y252 DUX4L4-201ENST00000566884 1269 ntBASIC19.74■□□□□ 0.75
RNF6Q9Y252 CCDC92B-201ENST00000575506 885 ntBASIC19.74■□□□□ 0.75
RNF6Q9Y252 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RNF6Q9Y252 AC092437.1-201ENST00000624794 1048 ntBASIC19.74■□□□□ 0.75
RNF6Q9Y252 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF6Q9Y252 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF6Q9Y252 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF6Q9Y252 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF6Q9Y252 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF6Q9Y252 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RNF6Q9Y252 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RNF6Q9Y252 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF6Q9Y252 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF6Q9Y252 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF6Q9Y252 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF6Q9Y252 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF6Q9Y252 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF6Q9Y252 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF6Q9Y252 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF6Q9Y252 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms