Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE7Q9UBL6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.49■□□□□ 0.87
CPNE7Q9UBL6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE7Q9UBL6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.49■□□□□ 0.87
CPNE7Q9UBL6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.49■□□□□ 0.87
CPNE7Q9UBL6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.49■□□□□ 0.87
CPNE7Q9UBL6 KRT16P2-201ENST00000414673 1423 ntBASIC20.49■□□□□ 0.87
CPNE7Q9UBL6 AC061975.6-201ENST00000579045 1553 ntBASIC20.49■□□□□ 0.87
CPNE7Q9UBL6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.49■□□□□ 0.87
CPNE7Q9UBL6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE7Q9UBL6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE7Q9UBL6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE7Q9UBL6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE7Q9UBL6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE7Q9UBL6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.48■□□□□ 0.87
CPNE7Q9UBL6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.48■□□□□ 0.87
CPNE7Q9UBL6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE7Q9UBL6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.48■□□□□ 0.87
CPNE7Q9UBL6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.48■□□□□ 0.87
CPNE7Q9UBL6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE7Q9UBL6 AL050303.2-201ENST00000619798 666 ntBASIC20.48■□□□□ 0.87
CPNE7Q9UBL6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE7Q9UBL6 AC013268.1-206ENST00000638368 961 ntBASIC20.48■□□□□ 0.87
CPNE7Q9UBL6 AC112229.1-201ENST00000639295 961 ntBASIC20.48■□□□□ 0.87
CPNE7Q9UBL6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
CPNE7Q9UBL6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE7Q9UBL6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE7Q9UBL6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.48■□□□□ 0.87
CPNE7Q9UBL6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CPNE7Q9UBL6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.48■□□□□ 0.87
CPNE7Q9UBL6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.47■□□□□ 0.87
CPNE7Q9UBL6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE7Q9UBL6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.47■□□□□ 0.87
CPNE7Q9UBL6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE7Q9UBL6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE7Q9UBL6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CPNE7Q9UBL6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE7Q9UBL6 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.47■□□□□ 0.87
CPNE7Q9UBL6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.47■□□□□ 0.87
CPNE7Q9UBL6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.47■□□□□ 0.87
CPNE7Q9UBL6 AC104771.1-201ENST00000603335 964 ntBASIC20.47■□□□□ 0.87
CPNE7Q9UBL6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.47■□□□□ 0.87
CPNE7Q9UBL6 AL109923.1-201ENST00000618799 583 ntBASIC20.47■□□□□ 0.87
CPNE7Q9UBL6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE7Q9UBL6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE7Q9UBL6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE7Q9UBL6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
CPNE7Q9UBL6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE7Q9UBL6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE7Q9UBL6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE7Q9UBL6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE7Q9UBL6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE7Q9UBL6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.46■□□□□ 0.87
CPNE7Q9UBL6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.46■□□□□ 0.87
CPNE7Q9UBL6 GPX1P1-201ENST00000388829 606 ntBASIC20.46■□□□□ 0.87
CPNE7Q9UBL6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE7Q9UBL6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.46■□□□□ 0.87
CPNE7Q9UBL6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE7Q9UBL6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.46■□□□□ 0.87
CPNE7Q9UBL6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE7Q9UBL6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE7Q9UBL6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE7Q9UBL6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE7Q9UBL6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE7Q9UBL6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPNE7Q9UBL6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.45■□□□□ 0.87
CPNE7Q9UBL6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE7Q9UBL6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE7Q9UBL6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE7Q9UBL6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE7Q9UBL6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.45■□□□□ 0.86
CPNE7Q9UBL6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.45■□□□□ 0.86
CPNE7Q9UBL6 CLDN5-201ENST00000403084 2357 ntBASIC20.45■□□□□ 0.86
CPNE7Q9UBL6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE7Q9UBL6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE7Q9UBL6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPNE7Q9UBL6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.45■□□□□ 0.86
CPNE7Q9UBL6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE7Q9UBL6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
CPNE7Q9UBL6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE7Q9UBL6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.44■□□□□ 0.86
CPNE7Q9UBL6 AL121832.2-201ENST00000610979 668 ntBASIC20.44■□□□□ 0.86
CPNE7Q9UBL6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CPNE7Q9UBL6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPNE7Q9UBL6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CPNE7Q9UBL6 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CPNE7Q9UBL6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.44■□□□□ 0.86
CPNE7Q9UBL6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
CPNE7Q9UBL6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE7Q9UBL6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE7Q9UBL6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.43■□□□□ 0.86
CPNE7Q9UBL6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE7Q9UBL6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.43■□□□□ 0.86
CPNE7Q9UBL6 AC007322.4-201ENST00000509611 723 ntBASIC20.43■□□□□ 0.86
CPNE7Q9UBL6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.43■□□□□ 0.86
CPNE7Q9UBL6 AC083906.2-201ENST00000511578 360 ntBASIC20.43■□□□□ 0.86
CPNE7Q9UBL6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.43■□□□□ 0.86
CPNE7Q9UBL6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE7Q9UBL6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPNE7Q9UBL6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms