Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT1Q9P2V4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRIT1Q9P2V4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 AC061975.6-201ENST00000579045 1553 ntBASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 MKRN4P-201ENST00000444706 1521 ntBASIC20.43■□□□□ 0.86
LRIT1Q9P2V4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 AC127496.7-201ENST00000625110 1798 ntBASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 AC073210.2-201ENST00000430369 194 ntBASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.42■□□□□ 0.86
LRIT1Q9P2V4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRIT1Q9P2V4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRIT1Q9P2V4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRIT1Q9P2V4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.41■□□□□ 0.86
LRIT1Q9P2V4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRIT1Q9P2V4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.41■□□□□ 0.86
LRIT1Q9P2V4 MIR4758-201ENST00000577688 71 ntBASIC20.41■□□□□ 0.86
LRIT1Q9P2V4 RBM17P2-201ENST00000616397 1405 ntBASIC20.41■□□□□ 0.86
LRIT1Q9P2V4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRIT1Q9P2V4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRIT1Q9P2V4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.41■□□□□ 0.86
LRIT1Q9P2V4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.41■□□□□ 0.86
LRIT1Q9P2V4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRIT1Q9P2V4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LRIT1Q9P2V4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRIT1Q9P2V4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRIT1Q9P2V4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LRIT1Q9P2V4 MIPEPP3-201ENST00000412105 444 ntBASIC20.4■□□□□ 0.86
LRIT1Q9P2V4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRIT1Q9P2V4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.4■□□□□ 0.86
LRIT1Q9P2V4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.4■□□□□ 0.86
LRIT1Q9P2V4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRIT1Q9P2V4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
LRIT1Q9P2V4 AC016405.3-201ENST00000607710 860 ntBASIC20.4■□□□□ 0.86
LRIT1Q9P2V4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.4■□□□□ 0.86
LRIT1Q9P2V4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.4■□□□□ 0.86
LRIT1Q9P2V4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRIT1Q9P2V4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.39■□□□□ 0.86
LRIT1Q9P2V4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRIT1Q9P2V4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRIT1Q9P2V4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRIT1Q9P2V4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.39■□□□□ 0.85
LRIT1Q9P2V4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRIT1Q9P2V4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRIT1Q9P2V4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRIT1Q9P2V4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRIT1Q9P2V4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRIT1Q9P2V4 AL512625.2-201ENST00000417533 625 ntBASIC20.39■□□□□ 0.85
LRIT1Q9P2V4 AC093787.1-201ENST00000450396 207 ntBASIC20.39■□□□□ 0.85
LRIT1Q9P2V4 AC098934.4-201ENST00000564127 592 ntBASIC20.39■□□□□ 0.85
LRIT1Q9P2V4 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.39■□□□□ 0.85
LRIT1Q9P2V4 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.39■□□□□ 0.85
LRIT1Q9P2V4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRIT1Q9P2V4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
LRIT1Q9P2V4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRIT1Q9P2V4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.38■□□□□ 0.85
LRIT1Q9P2V4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRIT1Q9P2V4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRIT1Q9P2V4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.38■□□□□ 0.85
LRIT1Q9P2V4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.38■□□□□ 0.85
LRIT1Q9P2V4 AC012676.1-201ENST00000574705 1949 ntBASIC20.38■□□□□ 0.85
LRIT1Q9P2V4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRIT1Q9P2V4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.38■□□□□ 0.85
LRIT1Q9P2V4 TSPY20P-201ENST00000450910 630 ntBASIC20.38■□□□□ 0.85
LRIT1Q9P2V4 AL591742.1-201ENST00000604433 565 ntBASIC20.38■□□□□ 0.85
LRIT1Q9P2V4 TMEM191A-211ENST00000637163 1067 ntBASIC20.38■□□□□ 0.85
LRIT1Q9P2V4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRIT1Q9P2V4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms