Protein–RNA interactions for Protein: Q9NYG2

ZDHHC3, Palmitoyltransferase ZDHHC3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3Q9NYG2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZDHHC3Q9NYG2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZDHHC3Q9NYG2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZDHHC3Q9NYG2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
ZDHHC3Q9NYG2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 MIR935-201ENST00000401179 91 ntBASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ZDHHC3Q9NYG2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ZDHHC3Q9NYG2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZDHHC3Q9NYG2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZDHHC3Q9NYG2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.87■□□□□ 0.93
ZDHHC3Q9NYG2 NTF6G-201ENST00000591094 616 ntBASIC20.87■□□□□ 0.93
ZDHHC3Q9NYG2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ZDHHC3Q9NYG2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.87■□□□□ 0.93
ZDHHC3Q9NYG2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.87■□□□□ 0.93
ZDHHC3Q9NYG2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZDHHC3Q9NYG2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ZDHHC3Q9NYG2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZDHHC3Q9NYG2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ZDHHC3Q9NYG2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZDHHC3Q9NYG2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZDHHC3Q9NYG2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.86■□□□□ 0.93
ZDHHC3Q9NYG2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZDHHC3Q9NYG2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ZDHHC3Q9NYG2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZDHHC3Q9NYG2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZDHHC3Q9NYG2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
ZDHHC3Q9NYG2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
ZDHHC3Q9NYG2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.86■□□□□ 0.93
ZDHHC3Q9NYG2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.86■□□□□ 0.93
ZDHHC3Q9NYG2 KRT18P61-201ENST00000585825 1298 ntBASIC20.86■□□□□ 0.93
ZDHHC3Q9NYG2 MIR5787-201ENST00000611784 55 ntBASIC20.86■□□□□ 0.93
ZDHHC3Q9NYG2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ZDHHC3Q9NYG2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.86■□□□□ 0.93
ZDHHC3Q9NYG2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZDHHC3Q9NYG2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZDHHC3Q9NYG2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZDHHC3Q9NYG2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.85■□□□□ 0.93
ZDHHC3Q9NYG2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.85■□□□□ 0.93
ZDHHC3Q9NYG2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.85■□□□□ 0.93
ZDHHC3Q9NYG2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ZDHHC3Q9NYG2 AC010141.2-201ENST00000452426 721 ntBASIC20.85■□□□□ 0.93
ZDHHC3Q9NYG2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.85■□□□□ 0.93
ZDHHC3Q9NYG2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.85■□□□□ 0.93
ZDHHC3Q9NYG2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ZDHHC3Q9NYG2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.85■□□□□ 0.93
ZDHHC3Q9NYG2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ZDHHC3Q9NYG2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZDHHC3Q9NYG2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.85■□□□□ 0.93
ZDHHC3Q9NYG2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZDHHC3Q9NYG2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ZDHHC3Q9NYG2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ZDHHC3Q9NYG2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZDHHC3Q9NYG2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZDHHC3Q9NYG2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZDHHC3Q9NYG2 KRT19P1-201ENST00000405746 1186 ntBASIC20.84■□□□□ 0.93
ZDHHC3Q9NYG2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.84■□□□□ 0.93
ZDHHC3Q9NYG2 AP001160.3-201ENST00000601484 763 ntBASIC20.84■□□□□ 0.93
ZDHHC3Q9NYG2 AC008175.2-201ENST00000612840 297 ntBASIC20.84■□□□□ 0.93
ZDHHC3Q9NYG2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZDHHC3Q9NYG2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZDHHC3Q9NYG2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZDHHC3Q9NYG2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZDHHC3Q9NYG2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.84■□□□□ 0.93
ZDHHC3Q9NYG2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZDHHC3Q9NYG2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZDHHC3Q9NYG2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZDHHC3Q9NYG2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZDHHC3Q9NYG2 POU5F1P4-201ENST00000413175 1085 ntBASIC20.83■□□□□ 0.93
ZDHHC3Q9NYG2 KRT18P5-201ENST00000436075 1291 ntBASIC20.83■□□□□ 0.93
ZDHHC3Q9NYG2 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.83■□□□□ 0.93
ZDHHC3Q9NYG2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZDHHC3Q9NYG2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.83■□□□□ 0.93
ZDHHC3Q9NYG2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.83■□□□□ 0.92
ZDHHC3Q9NYG2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZDHHC3Q9NYG2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.83■□□□□ 0.92
ZDHHC3Q9NYG2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZDHHC3Q9NYG2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.83■□□□□ 0.92
ZDHHC3Q9NYG2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZDHHC3Q9NYG2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZDHHC3Q9NYG2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ZDHHC3Q9NYG2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms