Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.93■□□□□ 0.78
PRDM9Q9NQV7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.93■□□□□ 0.78
PRDM9Q9NQV7 AC022517.1-201ENST00000592429 346 ntBASIC19.93■□□□□ 0.78
PRDM9Q9NQV7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRDM9Q9NQV7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.93■□□□□ 0.78
PRDM9Q9NQV7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.93■□□□□ 0.78
PRDM9Q9NQV7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.93■□□□□ 0.78
PRDM9Q9NQV7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.93■□□□□ 0.78
PRDM9Q9NQV7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 AC092666.2-201ENST00000613287 246 ntBASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM9Q9NQV7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM9Q9NQV7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PRDM9Q9NQV7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.91■□□□□ 0.78
PRDM9Q9NQV7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM9Q9NQV7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.91■□□□□ 0.78
PRDM9Q9NQV7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.91■□□□□ 0.78
PRDM9Q9NQV7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM9Q9NQV7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM9Q9NQV7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM9Q9NQV7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM9Q9NQV7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.91■□□□□ 0.78
PRDM9Q9NQV7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PRDM9Q9NQV7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM9Q9NQV7 Z98882.1-201ENST00000622160 2253 ntBASIC19.91■□□□□ 0.78
PRDM9Q9NQV7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM9Q9NQV7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM9Q9NQV7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRDM9Q9NQV7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 AC138907.5-202ENST00000569484 235 ntBASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRDM9Q9NQV7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PRDM9Q9NQV7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM9Q9NQV7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.89■□□□□ 0.77
PRDM9Q9NQV7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.89■□□□□ 0.77
PRDM9Q9NQV7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM9Q9NQV7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM9Q9NQV7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM9Q9NQV7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.89■□□□□ 0.77
PRDM9Q9NQV7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM9Q9NQV7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM9Q9NQV7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.89■□□□□ 0.77
PRDM9Q9NQV7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM9Q9NQV7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM9Q9NQV7 AC137761.2-201ENST00000561729 223 ntBASIC19.89■□□□□ 0.77
PRDM9Q9NQV7 AC145350.3-201ENST00000569033 163 ntBASIC19.89■□□□□ 0.77
PRDM9Q9NQV7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.89■□□□□ 0.77
PRDM9Q9NQV7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.89■□□□□ 0.77
PRDM9Q9NQV7 AP001160.3-201ENST00000601484 763 ntBASIC19.89■□□□□ 0.77
PRDM9Q9NQV7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM9Q9NQV7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRDM9Q9NQV7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.88■□□□□ 0.77
PRDM9Q9NQV7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM9Q9NQV7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms