Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
PFDN4Q9NQP4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN4Q9NQP4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.66■□□□□ 0.9
PFDN4Q9NQP4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PFDN4Q9NQP4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN4Q9NQP4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN4Q9NQP4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.65■□□□□ 0.9
PFDN4Q9NQP4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN4Q9NQP4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.65■□□□□ 0.9
PFDN4Q9NQP4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.65■□□□□ 0.9
PFDN4Q9NQP4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PFDN4Q9NQP4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN4Q9NQP4 SERBP1P1-201ENST00000396021 1160 ntBASIC20.65■□□□□ 0.9
PFDN4Q9NQP4 AL138724.1-201ENST00000606771 1088 ntBASIC20.65■□□□□ 0.9
PFDN4Q9NQP4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN4Q9NQP4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN4Q9NQP4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
PFDN4Q9NQP4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PFDN4Q9NQP4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.65■□□□□ 0.9
PFDN4Q9NQP4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN4Q9NQP4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN4Q9NQP4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.65■□□□□ 0.9
PFDN4Q9NQP4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PFDN4Q9NQP4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PFDN4Q9NQP4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.64■□□□□ 0.9
PFDN4Q9NQP4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PFDN4Q9NQP4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PFDN4Q9NQP4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PFDN4Q9NQP4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
PFDN4Q9NQP4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.64■□□□□ 0.89
PFDN4Q9NQP4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PFDN4Q9NQP4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PFDN4Q9NQP4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PFDN4Q9NQP4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PFDN4Q9NQP4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PFDN4Q9NQP4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PFDN4Q9NQP4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PFDN4Q9NQP4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PFDN4Q9NQP4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PFDN4Q9NQP4 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.63■□□□□ 0.89
PFDN4Q9NQP4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.63■□□□□ 0.89
PFDN4Q9NQP4 AC073130.3-201ENST00000624389 2278 ntBASIC20.63■□□□□ 0.89
PFDN4Q9NQP4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PFDN4Q9NQP4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PFDN4Q9NQP4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PFDN4Q9NQP4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PFDN4Q9NQP4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PFDN4Q9NQP4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.62■□□□□ 0.89
PFDN4Q9NQP4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PFDN4Q9NQP4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.62■□□□□ 0.89
PFDN4Q9NQP4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
PFDN4Q9NQP4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PFDN4Q9NQP4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PFDN4Q9NQP4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PFDN4Q9NQP4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PFDN4Q9NQP4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
PFDN4Q9NQP4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PFDN4Q9NQP4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PFDN4Q9NQP4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PFDN4Q9NQP4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PFDN4Q9NQP4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
PFDN4Q9NQP4 AC026471.6-201ENST00000622954 1905 ntBASIC20.61■□□□□ 0.89
PFDN4Q9NQP4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PFDN4Q9NQP4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.61■□□□□ 0.89
PFDN4Q9NQP4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.61■□□□□ 0.89
PFDN4Q9NQP4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PFDN4Q9NQP4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PFDN4Q9NQP4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.61■□□□□ 0.89
PFDN4Q9NQP4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PFDN4Q9NQP4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.61■□□□□ 0.89
PFDN4Q9NQP4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
PFDN4Q9NQP4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.61■□□□□ 0.89
PFDN4Q9NQP4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PFDN4Q9NQP4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.61■□□□□ 0.89
PFDN4Q9NQP4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PFDN4Q9NQP4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PFDN4Q9NQP4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PFDN4Q9NQP4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.6■□□□□ 0.89
PFDN4Q9NQP4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.6■□□□□ 0.89
PFDN4Q9NQP4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN4Q9NQP4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN4Q9NQP4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN4Q9NQP4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.6■□□□□ 0.89
PFDN4Q9NQP4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN4Q9NQP4 AP005435.1-201ENST00000529293 1178 ntBASIC20.6■□□□□ 0.89
PFDN4Q9NQP4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PFDN4Q9NQP4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PFDN4Q9NQP4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN4Q9NQP4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN4Q9NQP4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN4Q9NQP4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN4Q9NQP4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN4Q9NQP4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN4Q9NQP4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PFDN4Q9NQP4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.59■□□□□ 0.89
PFDN4Q9NQP4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.59■□□□□ 0.89
PFDN4Q9NQP4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PFDN4Q9NQP4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PFDN4Q9NQP4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PFDN4Q9NQP4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms