Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMG20AQ9NP66 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMG20AQ9NP66 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
HMG20AQ9NP66 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMG20AQ9NP66 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.07■□□□□ 0.64
HMG20AQ9NP66 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMG20AQ9NP66 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
HMG20AQ9NP66 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMG20AQ9NP66 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMG20AQ9NP66 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.07■□□□□ 0.64
HMG20AQ9NP66 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.06■□□□□ 0.64
HMG20AQ9NP66 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMG20AQ9NP66 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMG20AQ9NP66 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMG20AQ9NP66 AC018445.3-201ENST00000624177 1945 ntBASIC19.06■□□□□ 0.64
HMG20AQ9NP66 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMG20AQ9NP66 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.06■□□□□ 0.64
HMG20AQ9NP66 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMG20AQ9NP66 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMG20AQ9NP66 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.06■□□□□ 0.64
HMG20AQ9NP66 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.06■□□□□ 0.64
HMG20AQ9NP66 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMG20AQ9NP66 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMG20AQ9NP66 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMG20AQ9NP66 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.06■□□□□ 0.64
HMG20AQ9NP66 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 BX323043.1-201ENST00000641006 1765 ntBASIC19.05■□□□□ 0.64
HMG20AQ9NP66 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.05■□□□□ 0.64
HMG20AQ9NP66 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
HMG20AQ9NP66 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMG20AQ9NP66 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.04■□□□□ 0.64
HMG20AQ9NP66 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMG20AQ9NP66 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.04■□□□□ 0.64
HMG20AQ9NP66 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMG20AQ9NP66 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
HMG20AQ9NP66 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMG20AQ9NP66 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
HMG20AQ9NP66 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMG20AQ9NP66 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.04■□□□□ 0.64
HMG20AQ9NP66 OXCT2P1-201ENST00000447263 1535 ntBASIC19.04■□□□□ 0.64
HMG20AQ9NP66 AC021242.3-201ENST00000607598 1377 ntBASIC19.04■□□□□ 0.64
HMG20AQ9NP66 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMG20AQ9NP66 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMG20AQ9NP66 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.04■□□□□ 0.64
HMG20AQ9NP66 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMG20AQ9NP66 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMG20AQ9NP66 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HMG20AQ9NP66 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 PCDHAC2-203ENST00000615316 3011 ntBASIC19.03■□□□□ 0.64
HMG20AQ9NP66 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 BX664725.1-201ENST00000438252 379 ntBASIC19.03■□□□□ 0.64
HMG20AQ9NP66 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMG20AQ9NP66 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20AQ9NP66 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.02■□□□□ 0.64
HMG20AQ9NP66 SMG8-203ENST00000578922 2178 ntBASIC19.02■□□□□ 0.64
HMG20AQ9NP66 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20AQ9NP66 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMG20AQ9NP66 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms