Protein–RNA interactions for Protein: Q9HBF4

ZFYVE1, Zinc finger FYVE domain-containing protein 1, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1Q9HBF4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZFYVE1Q9HBF4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZFYVE1Q9HBF4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZFYVE1Q9HBF4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZFYVE1Q9HBF4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZFYVE1Q9HBF4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
ZFYVE1Q9HBF4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZFYVE1Q9HBF4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZFYVE1Q9HBF4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZFYVE1Q9HBF4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.13■□□□□ 0.97
ZFYVE1Q9HBF4 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.13■□□□□ 0.97
ZFYVE1Q9HBF4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZFYVE1Q9HBF4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZFYVE1Q9HBF4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZFYVE1Q9HBF4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZFYVE1Q9HBF4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ZFYVE1Q9HBF4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.12■□□□□ 0.97
ZFYVE1Q9HBF4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZFYVE1Q9HBF4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.12■□□□□ 0.97
ZFYVE1Q9HBF4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.12■□□□□ 0.97
ZFYVE1Q9HBF4 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.12■□□□□ 0.97
ZFYVE1Q9HBF4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ZFYVE1Q9HBF4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZFYVE1Q9HBF4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZFYVE1Q9HBF4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZFYVE1Q9HBF4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
ZFYVE1Q9HBF4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.12■□□□□ 0.97
ZFYVE1Q9HBF4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZFYVE1Q9HBF4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZFYVE1Q9HBF4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZFYVE1Q9HBF4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZFYVE1Q9HBF4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.11■□□□□ 0.97
ZFYVE1Q9HBF4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.11■□□□□ 0.97
ZFYVE1Q9HBF4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.11■□□□□ 0.97
ZFYVE1Q9HBF4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZFYVE1Q9HBF4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZFYVE1Q9HBF4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZFYVE1Q9HBF4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZFYVE1Q9HBF4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.11■□□□□ 0.97
ZFYVE1Q9HBF4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.11■□□□□ 0.97
ZFYVE1Q9HBF4 AP001160.3-201ENST00000601484 763 ntBASIC21.11■□□□□ 0.97
ZFYVE1Q9HBF4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZFYVE1Q9HBF4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZFYVE1Q9HBF4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZFYVE1Q9HBF4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ZFYVE1Q9HBF4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZFYVE1Q9HBF4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZFYVE1Q9HBF4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZFYVE1Q9HBF4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZFYVE1Q9HBF4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.1■□□□□ 0.97
ZFYVE1Q9HBF4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZFYVE1Q9HBF4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.1■□□□□ 0.97
ZFYVE1Q9HBF4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZFYVE1Q9HBF4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZFYVE1Q9HBF4 AC010141.2-201ENST00000452426 721 ntBASIC21.1■□□□□ 0.97
ZFYVE1Q9HBF4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.1■□□□□ 0.97
ZFYVE1Q9HBF4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.1■□□□□ 0.97
ZFYVE1Q9HBF4 AC008175.2-201ENST00000612840 297 ntBASIC21.1■□□□□ 0.97
ZFYVE1Q9HBF4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZFYVE1Q9HBF4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZFYVE1Q9HBF4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZFYVE1Q9HBF4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZFYVE1Q9HBF4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZFYVE1Q9HBF4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.1■□□□□ 0.97
ZFYVE1Q9HBF4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE1Q9HBF4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE1Q9HBF4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.09■□□□□ 0.97
ZFYVE1Q9HBF4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE1Q9HBF4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE1Q9HBF4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE1Q9HBF4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE1Q9HBF4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.09■□□□□ 0.97
ZFYVE1Q9HBF4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.09■□□□□ 0.97
ZFYVE1Q9HBF4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE1Q9HBF4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZFYVE1Q9HBF4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ZFYVE1Q9HBF4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
ZFYVE1Q9HBF4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms