Protein–RNA interactions for Protein: Q9H741

C12orf49, UPF0454 protein C12orf49, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49Q9H741 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.71■□□□□ 0.59
C12orf49Q9H741 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
C12orf49Q9H741 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.71■□□□□ 0.59
C12orf49Q9H741 SLC7A5P2-201ENST00000553010 536 ntBASIC18.71■□□□□ 0.59
C12orf49Q9H741 MFSD11-216ENST00000590393 1141 ntBASIC18.71■□□□□ 0.59
C12orf49Q9H741 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.71■□□□□ 0.59
C12orf49Q9H741 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
C12orf49Q9H741 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.71■□□□□ 0.59
C12orf49Q9H741 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.71■□□□□ 0.59
C12orf49Q9H741 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
C12orf49Q9H741 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
C12orf49Q9H741 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
C12orf49Q9H741 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C12orf49Q9H741 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.7■□□□□ 0.58
C12orf49Q9H741 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
C12orf49Q9H741 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C12orf49Q9H741 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C12orf49Q9H741 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C12orf49Q9H741 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C12orf49Q9H741 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C12orf49Q9H741 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.7■□□□□ 0.58
C12orf49Q9H741 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C12orf49Q9H741 CDCA4P2-201ENST00000441182 718 ntBASIC18.7■□□□□ 0.58
C12orf49Q9H741 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C12orf49Q9H741 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C12orf49Q9H741 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.7■□□□□ 0.58
C12orf49Q9H741 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.7■□□□□ 0.58
C12orf49Q9H741 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
C12orf49Q9H741 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.7■□□□□ 0.58
C12orf49Q9H741 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C12orf49Q9H741 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.7■□□□□ 0.58
C12orf49Q9H741 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C12orf49Q9H741 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C12orf49Q9H741 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf49Q9H741 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf49Q9H741 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf49Q9H741 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf49Q9H741 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.69■□□□□ 0.58
C12orf49Q9H741 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf49Q9H741 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
C12orf49Q9H741 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf49Q9H741 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf49Q9H741 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.69■□□□□ 0.58
C12orf49Q9H741 AC120498.10-201ENST00000621827 505 ntBASIC18.69■□□□□ 0.58
C12orf49Q9H741 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf49Q9H741 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf49Q9H741 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.69■□□□□ 0.58
C12orf49Q9H741 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.69■□□□□ 0.58
C12orf49Q9H741 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf49Q9H741 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf49Q9H741 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
C12orf49Q9H741 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf49Q9H741 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C12orf49Q9H741 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C12orf49Q9H741 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C12orf49Q9H741 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
C12orf49Q9H741 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
C12orf49Q9H741 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.68■□□□□ 0.58
C12orf49Q9H741 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
C12orf49Q9H741 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C12orf49Q9H741 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
C12orf49Q9H741 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C12orf49Q9H741 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C12orf49Q9H741 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.68■□□□□ 0.58
C12orf49Q9H741 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C12orf49Q9H741 KRT18P20-201ENST00000548986 1279 ntBASIC18.68■□□□□ 0.58
C12orf49Q9H741 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.68■□□□□ 0.58
C12orf49Q9H741 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.68■□□□□ 0.58
C12orf49Q9H741 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.68■□□□□ 0.58
C12orf49Q9H741 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.68■□□□□ 0.58
C12orf49Q9H741 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.68■□□□□ 0.58
C12orf49Q9H741 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C12orf49Q9H741 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C12orf49Q9H741 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C12orf49Q9H741 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C12orf49Q9H741 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C12orf49Q9H741 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C12orf49Q9H741 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.68■□□□□ 0.58
C12orf49Q9H741 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
C12orf49Q9H741 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C12orf49Q9H741 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.67■□□□□ 0.58
C12orf49Q9H741 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C12orf49Q9H741 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.67■□□□□ 0.58
C12orf49Q9H741 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
C12orf49Q9H741 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C12orf49Q9H741 EP400NL-214ENST00000641289 2402 ntBASIC18.67■□□□□ 0.58
C12orf49Q9H741 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C12orf49Q9H741 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.67■□□□□ 0.58
C12orf49Q9H741 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.67■□□□□ 0.58
C12orf49Q9H741 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C12orf49Q9H741 AC026185.1-201ENST00000445748 174 ntBASIC18.67■□□□□ 0.58
C12orf49Q9H741 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C12orf49Q9H741 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.67■□□□□ 0.58
C12orf49Q9H741 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C12orf49Q9H741 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
C12orf49Q9H741 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
C12orf49Q9H741 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
C12orf49Q9H741 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
C12orf49Q9H741 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
C12orf49Q9H741 AC061975.6-201ENST00000579045 1553 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms