Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS16Q9H269 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
VPS16Q9H269 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
VPS16Q9H269 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS16Q9H269 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
VPS16Q9H269 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.13■■□□□ 1.29
VPS16Q9H269 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.13■■□□□ 1.29
VPS16Q9H269 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
VPS16Q9H269 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.13■■□□□ 1.29
VPS16Q9H269 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
VPS16Q9H269 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
VPS16Q9H269 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VPS16Q9H269 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
VPS16Q9H269 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VPS16Q9H269 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VPS16Q9H269 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
VPS16Q9H269 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VPS16Q9H269 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.12■■□□□ 1.29
VPS16Q9H269 AC024257.2-201ENST00000549699 147 ntBASIC23.12■■□□□ 1.29
VPS16Q9H269 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VPS16Q9H269 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.12■■□□□ 1.29
VPS16Q9H269 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.12■■□□□ 1.29
VPS16Q9H269 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VPS16Q9H269 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
VPS16Q9H269 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
VPS16Q9H269 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS16Q9H269 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS16Q9H269 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS16Q9H269 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS16Q9H269 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
VPS16Q9H269 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.11■■□□□ 1.29
VPS16Q9H269 AC233992.3-201ENST00000607491 485 ntBASIC23.11■■□□□ 1.29
VPS16Q9H269 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS16Q9H269 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.11■■□□□ 1.29
VPS16Q9H269 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
VPS16Q9H269 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS16Q9H269 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
VPS16Q9H269 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS16Q9H269 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
VPS16Q9H269 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
VPS16Q9H269 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
VPS16Q9H269 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
VPS16Q9H269 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
VPS16Q9H269 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
VPS16Q9H269 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
VPS16Q9H269 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.1■■□□□ 1.29
VPS16Q9H269 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
VPS16Q9H269 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
VPS16Q9H269 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
VPS16Q9H269 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.1■■□□□ 1.29
VPS16Q9H269 AC126544.1-201ENST00000580842 1059 ntBASIC23.1■■□□□ 1.29
VPS16Q9H269 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.1■■□□□ 1.29
VPS16Q9H269 AL136162.1-201ENST00000607711 1078 ntBASIC23.1■■□□□ 1.29
VPS16Q9H269 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
VPS16Q9H269 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
VPS16Q9H269 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.1■■□□□ 1.29
VPS16Q9H269 LINC01006-201ENST00000333319 2292 ntBASIC23.1■■□□□ 1.29
VPS16Q9H269 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.1■■□□□ 1.29
VPS16Q9H269 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
VPS16Q9H269 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.09■■□□□ 1.29
VPS16Q9H269 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
VPS16Q9H269 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
VPS16Q9H269 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
VPS16Q9H269 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.09■■□□□ 1.29
VPS16Q9H269 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
VPS16Q9H269 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
VPS16Q9H269 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.09■■□□□ 1.29
VPS16Q9H269 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.09■■□□□ 1.29
VPS16Q9H269 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
VPS16Q9H269 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.09■■□□□ 1.29
VPS16Q9H269 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.09■■□□□ 1.29
VPS16Q9H269 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
VPS16Q9H269 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
VPS16Q9H269 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.09■■□□□ 1.29
VPS16Q9H269 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
VPS16Q9H269 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
VPS16Q9H269 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
VPS16Q9H269 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
VPS16Q9H269 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.08■■□□□ 1.29
VPS16Q9H269 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
VPS16Q9H269 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
VPS16Q9H269 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
VPS16Q9H269 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
VPS16Q9H269 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
VPS16Q9H269 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.08■■□□□ 1.28
VPS16Q9H269 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
VPS16Q9H269 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
VPS16Q9H269 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
VPS16Q9H269 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.07■■□□□ 1.28
VPS16Q9H269 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS16Q9H269 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
VPS16Q9H269 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.07■■□□□ 1.28
VPS16Q9H269 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
VPS16Q9H269 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS16Q9H269 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
VPS16Q9H269 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
VPS16Q9H269 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.07■■□□□ 1.28
VPS16Q9H269 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
VPS16Q9H269 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.07■■□□□ 1.28
VPS16Q9H269 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms