Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC068473.5-201ENST00000616428 2072 ntBASIC21.92■■□□□ 1.1
RNF38Q9H0F5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 KRT16P2-201ENST00000414673 1423 ntBASIC21.92■■□□□ 1.1
RNF38Q9H0F5 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 AC133552.2-202ENST00000575694 574 ntBASIC21.92■■□□□ 1.1
RNF38Q9H0F5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF38Q9H0F5 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF38Q9H0F5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.91■■□□□ 1.1
RNF38Q9H0F5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.91■■□□□ 1.1
RNF38Q9H0F5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF38Q9H0F5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF38Q9H0F5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
RNF38Q9H0F5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.91■■□□□ 1.1
RNF38Q9H0F5 AF201337.1-201ENST00000520239 748 ntBASIC21.91■■□□□ 1.1
RNF38Q9H0F5 AC142086.2-201ENST00000569753 217 ntBASIC21.91■■□□□ 1.1
RNF38Q9H0F5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.91■■□□□ 1.1
RNF38Q9H0F5 AC242852.2-201ENST00000615738 1807 ntBASIC21.91■■□□□ 1.1
RNF38Q9H0F5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF38Q9H0F5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF38Q9H0F5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF38Q9H0F5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF38Q9H0F5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF38Q9H0F5 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF38Q9H0F5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
RNF38Q9H0F5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RNF38Q9H0F5 AC007322.4-201ENST00000509611 723 ntBASIC21.9■■□□□ 1.1
RNF38Q9H0F5 GUSBP5-202ENST00000510805 1989 ntBASIC21.9■■□□□ 1.1
RNF38Q9H0F5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF38Q9H0F5 RBM17P2-201ENST00000616397 1405 ntBASIC21.89■■□□□ 1.1
RNF38Q9H0F5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
RNF38Q9H0F5 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RNF38Q9H0F5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF38Q9H0F5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RNF38Q9H0F5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF38Q9H0F5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
RNF38Q9H0F5 AL138781.1-201ENST00000566567 1274 ntBASIC21.89■■□□□ 1.09
RNF38Q9H0F5 AC105036.2-201ENST00000569468 176 ntBASIC21.89■■□□□ 1.09
RNF38Q9H0F5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.89■■□□□ 1.09
RNF38Q9H0F5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF38Q9H0F5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF38Q9H0F5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.89■■□□□ 1.09
RNF38Q9H0F5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.88■■□□□ 1.09
RNF38Q9H0F5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF38Q9H0F5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RNF38Q9H0F5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF38Q9H0F5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF38Q9H0F5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
RNF38Q9H0F5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF38Q9H0F5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF38Q9H0F5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF38Q9H0F5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF38Q9H0F5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.88■■□□□ 1.09
RNF38Q9H0F5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.88■■□□□ 1.09
RNF38Q9H0F5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF38Q9H0F5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF38Q9H0F5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
RNF38Q9H0F5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.87■■□□□ 1.09
RNF38Q9H0F5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF38Q9H0F5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF38Q9H0F5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF38Q9H0F5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF38Q9H0F5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF38Q9H0F5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF38Q9H0F5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF38Q9H0F5 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF38Q9H0F5 CYP2T1P-201ENST00000432607 1285 ntBASIC21.87■■□□□ 1.09
RNF38Q9H0F5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF38Q9H0F5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
RNF38Q9H0F5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF38Q9H0F5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF38Q9H0F5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF38Q9H0F5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF38Q9H0F5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF38Q9H0F5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF38Q9H0F5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF38Q9H0F5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF38Q9H0F5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF38Q9H0F5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
RNF38Q9H0F5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF38Q9H0F5 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF38Q9H0F5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms