Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
KRTAP4-1Q9BYQ7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC11.05□□□□□ -0.64
KRTAP4-1Q9BYQ7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC11.05□□□□□ -0.64
KRTAP4-1Q9BYQ7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC11.05□□□□□ -0.64
KRTAP4-1Q9BYQ7 AL162412.1-201ENST00000567129 965 ntBASIC11.05□□□□□ -0.64
KRTAP4-1Q9BYQ7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
KRTAP4-1Q9BYQ7 USP36-216ENST00000589424 970 ntTSL 5 BASIC11.05□□□□□ -0.64
KRTAP4-1Q9BYQ7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC11.05□□□□□ -0.64
KRTAP4-1Q9BYQ7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC11.05□□□□□ -0.64
KRTAP4-1Q9BYQ7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP4-1Q9BYQ7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC11.05□□□□□ -0.64
KRTAP4-1Q9BYQ7 AC243732.1-201ENST00000612648 864 ntBASIC11.05□□□□□ -0.64
KRTAP4-1Q9BYQ7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP4-1Q9BYQ7 AP006294.2-201ENST00000641667 209 ntBASIC11.05□□□□□ -0.64
KRTAP4-1Q9BYQ7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP4-1Q9BYQ7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC11.05□□□□□ -0.64
KRTAP4-1Q9BYQ7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC11.05□□□□□ -0.64
KRTAP4-1Q9BYQ7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC11.05□□□□□ -0.64
KRTAP4-1Q9BYQ7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 AC093323.1-202ENST00000635031 2045 ntBASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 AC233263.1-201ENST00000578059 224 ntBASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 AL359736.2-201ENST00000621992 437 ntBASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP4-1Q9BYQ7 AC026471.6-201ENST00000622954 1905 ntBASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 AC003102.1-202ENST00000563394 1796 ntBASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 AC091799.1-201ENST00000422823 811 ntBASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 AC008550.1-201ENST00000511500 884 ntBASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 AC120498.10-201ENST00000621827 505 ntBASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
KRTAP4-1Q9BYQ7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
KRTAP4-1Q9BYQ7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
KRTAP4-1Q9BYQ7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC11.02□□□□□ -0.64
KRTAP4-1Q9BYQ7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC11.02□□□□□ -0.64
KRTAP4-1Q9BYQ7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC11.02□□□□□ -0.64
KRTAP4-1Q9BYQ7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 MME-217ENST00000616757 1315 ntTSL 5 BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
KRTAP4-1Q9BYQ7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
KRTAP4-1Q9BYQ7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms