Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RSPO3Q9BXY4 MIR939-201ENST00000401314 82 ntBASIC19.45■□□□□ 0.7
RSPO3Q9BXY4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RSPO3Q9BXY4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RSPO3Q9BXY4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RSPO3Q9BXY4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.45■□□□□ 0.7
RSPO3Q9BXY4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.45■□□□□ 0.7
RSPO3Q9BXY4 LINC01006-201ENST00000333319 2292 ntBASIC19.45■□□□□ 0.7
RSPO3Q9BXY4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RSPO3Q9BXY4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.45■□□□□ 0.7
RSPO3Q9BXY4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RSPO3Q9BXY4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.44■□□□□ 0.7
RSPO3Q9BXY4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RSPO3Q9BXY4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RSPO3Q9BXY4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RSPO3Q9BXY4 AC005224.4-201ENST00000583262 1652 ntBASIC19.44■□□□□ 0.7
RSPO3Q9BXY4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.44■□□□□ 0.7
RSPO3Q9BXY4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.44■□□□□ 0.7
RSPO3Q9BXY4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RSPO3Q9BXY4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.44■□□□□ 0.7
RSPO3Q9BXY4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.44■□□□□ 0.7
RSPO3Q9BXY4 AC105233.4-201ENST00000642045 216 ntBASIC19.44■□□□□ 0.7
RSPO3Q9BXY4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RSPO3Q9BXY4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RSPO3Q9BXY4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RSPO3Q9BXY4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.44■□□□□ 0.7
RSPO3Q9BXY4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 EDA-201ENST00000338901 1233 ntBASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 SUDS3P1-201ENST00000505831 966 ntBASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 AF213884.3-201ENST00000563833 479 ntBASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 FEM1AP1-201ENST00000431297 1995 ntBASIC19.43■□□□□ 0.7
RSPO3Q9BXY4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 AC092667.1-201ENST00000434301 2586 ntBASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 AC027682.1-201ENST00000562846 899 ntBASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 AC009237.3-201ENST00000393279 1427 ntBASIC19.42■□□□□ 0.7
RSPO3Q9BXY4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RSPO3Q9BXY4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RSPO3Q9BXY4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.41■□□□□ 0.7
RSPO3Q9BXY4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RSPO3Q9BXY4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RSPO3Q9BXY4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RSPO3Q9BXY4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RSPO3Q9BXY4 MIR572-201ENST00000384983 95 ntBASIC19.41■□□□□ 0.7
RSPO3Q9BXY4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RSPO3Q9BXY4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.41■□□□□ 0.7
RSPO3Q9BXY4 RASA4CP-201ENST00000424092 1398 ntBASIC19.41■□□□□ 0.7
RSPO3Q9BXY4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.41■□□□□ 0.7
RSPO3Q9BXY4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RSPO3Q9BXY4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RSPO3Q9BXY4 BX005040.4-201ENST00000637145 1518 ntBASIC19.41■□□□□ 0.7
RSPO3Q9BXY4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RSPO3Q9BXY4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO3Q9BXY4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO3Q9BXY4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.4■□□□□ 0.7
RSPO3Q9BXY4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO3Q9BXY4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO3Q9BXY4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RSPO3Q9BXY4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.4■□□□□ 0.7
RSPO3Q9BXY4 AL355001.2-201ENST00000620617 1191 ntBASIC19.4■□□□□ 0.7
RSPO3Q9BXY4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO3Q9BXY4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RSPO3Q9BXY4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.4■□□□□ 0.7
RSPO3Q9BXY4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO3Q9BXY4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO3Q9BXY4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RSPO3Q9BXY4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms