Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRFN3Q9BTN0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.37■■□□□ 1.01
LRFN3Q9BTN0 KRT18P56-201ENST00000507275 550 ntBASIC21.37■■□□□ 1.01
LRFN3Q9BTN0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.37■■□□□ 1.01
LRFN3Q9BTN0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.37■■□□□ 1.01
LRFN3Q9BTN0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.37■■□□□ 1.01
LRFN3Q9BTN0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LRFN3Q9BTN0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.37■■□□□ 1.01
LRFN3Q9BTN0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRFN3Q9BTN0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.37■■□□□ 1.01
LRFN3Q9BTN0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRFN3Q9BTN0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
LRFN3Q9BTN0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LRFN3Q9BTN0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.36■■□□□ 1.01
LRFN3Q9BTN0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
LRFN3Q9BTN0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRFN3Q9BTN0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRFN3Q9BTN0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRFN3Q9BTN0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
LRFN3Q9BTN0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.36■■□□□ 1.01
LRFN3Q9BTN0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.36■■□□□ 1.01
LRFN3Q9BTN0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.36■■□□□ 1.01
LRFN3Q9BTN0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRFN3Q9BTN0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.36■■□□□ 1.01
LRFN3Q9BTN0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LRFN3Q9BTN0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
LRFN3Q9BTN0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
LRFN3Q9BTN0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
LRFN3Q9BTN0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRFN3Q9BTN0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRFN3Q9BTN0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
LRFN3Q9BTN0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LRFN3Q9BTN0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
LRFN3Q9BTN0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.35■■□□□ 1.01
LRFN3Q9BTN0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
LRFN3Q9BTN0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.35■■□□□ 1.01
LRFN3Q9BTN0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.35■■□□□ 1.01
LRFN3Q9BTN0 AC243732.1-201ENST00000612648 864 ntBASIC21.35■■□□□ 1.01
LRFN3Q9BTN0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.35■■□□□ 1.01
LRFN3Q9BTN0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LRFN3Q9BTN0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
LRFN3Q9BTN0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.35■■□□□ 1.01
LRFN3Q9BTN0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
LRFN3Q9BTN0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.34■■□□□ 1.01
LRFN3Q9BTN0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.34■■□□□ 1.01
LRFN3Q9BTN0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
LRFN3Q9BTN0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LRFN3Q9BTN0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LRFN3Q9BTN0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LRFN3Q9BTN0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.34■■□□□ 1.01
LRFN3Q9BTN0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.34■■□□□ 1.01
LRFN3Q9BTN0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRFN3Q9BTN0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.34■■□□□ 1.01
LRFN3Q9BTN0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.34■■□□□ 1.01
LRFN3Q9BTN0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.34■■□□□ 1.01
LRFN3Q9BTN0 AL589743.5-201ENST00000616611 1050 ntBASIC21.34■■□□□ 1.01
LRFN3Q9BTN0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.34■■□□□ 1.01
LRFN3Q9BTN0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
LRFN3Q9BTN0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.33■■□□□ 1.01
LRFN3Q9BTN0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRFN3Q9BTN0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.33■■□□□ 1.01
LRFN3Q9BTN0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LRFN3Q9BTN0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.33■■□□□ 1.01
LRFN3Q9BTN0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
LRFN3Q9BTN0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
LRFN3Q9BTN0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.33■■□□□ 1.01
LRFN3Q9BTN0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRFN3Q9BTN0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.32■■□□□ 1
LRFN3Q9BTN0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
LRFN3Q9BTN0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
LRFN3Q9BTN0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LRFN3Q9BTN0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LRFN3Q9BTN0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LRFN3Q9BTN0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LRFN3Q9BTN0 AL137013.1-201ENST00000432946 1228 ntBASIC21.32■■□□□ 1
LRFN3Q9BTN0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LRFN3Q9BTN0 AC104076.2-201ENST00000448912 469 ntBASIC21.32■■□□□ 1
LRFN3Q9BTN0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
LRFN3Q9BTN0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.32■■□□□ 1
LRFN3Q9BTN0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.32■■□□□ 1
LRFN3Q9BTN0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
LRFN3Q9BTN0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.32■■□□□ 1
LRFN3Q9BTN0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRFN3Q9BTN0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.31■■□□□ 1
LRFN3Q9BTN0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
LRFN3Q9BTN0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LRFN3Q9BTN0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LRFN3Q9BTN0 DUSP8P3-201ENST00000399571 1760 ntBASIC21.31■■□□□ 1
LRFN3Q9BTN0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.31■■□□□ 1
LRFN3Q9BTN0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
LRFN3Q9BTN0 TERF1P1-201ENST00000311003 1181 ntBASIC21.31■■□□□ 1
LRFN3Q9BTN0 AL355355.2-201ENST00000442321 338 ntBASIC21.31■■□□□ 1
LRFN3Q9BTN0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.31■■□□□ 1
LRFN3Q9BTN0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.31■■□□□ 1
LRFN3Q9BTN0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.31■■□□□ 1
LRFN3Q9BTN0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.31■■□□□ 1
LRFN3Q9BTN0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LRFN3Q9BTN0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.31■■□□□ 1
LRFN3Q9BTN0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LRFN3Q9BTN0 AC100791.3-201ENST00000617619 330 ntBASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms