Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NDNQ99608 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NDNQ99608 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.08■□□□□ 0.97
NDNQ99608 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NDNQ99608 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NDNQ99608 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.08■□□□□ 0.97
NDNQ99608 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NDNQ99608 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NDNQ99608 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
NDNQ99608 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.08■□□□□ 0.97
NDNQ99608 AC105233.4-201ENST00000642045 216 ntBASIC21.08■□□□□ 0.97
NDNQ99608 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NDNQ99608 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
NDNQ99608 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NDNQ99608 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.07■□□□□ 0.96
NDNQ99608 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NDNQ99608 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDNQ99608 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NDNQ99608 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.07■□□□□ 0.96
NDNQ99608 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
NDNQ99608 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.07■□□□□ 0.96
NDNQ99608 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
NDNQ99608 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.07■□□□□ 0.96
NDNQ99608 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NDNQ99608 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NDNQ99608 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDNQ99608 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.06■□□□□ 0.96
NDNQ99608 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
NDNQ99608 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NDNQ99608 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDNQ99608 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NDNQ99608 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NDNQ99608 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.06■□□□□ 0.96
NDNQ99608 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.06■□□□□ 0.96
NDNQ99608 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.06■□□□□ 0.96
NDNQ99608 AL136967.2-201ENST00000623968 743 ntBASIC21.06■□□□□ 0.96
NDNQ99608 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NDNQ99608 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NDNQ99608 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.06■□□□□ 0.96
NDNQ99608 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
NDNQ99608 RASA4CP-201ENST00000424092 1398 ntBASIC21.06■□□□□ 0.96
NDNQ99608 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NDNQ99608 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDNQ99608 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
NDNQ99608 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDNQ99608 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NDNQ99608 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NDNQ99608 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDNQ99608 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDNQ99608 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDNQ99608 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NDNQ99608 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.05■□□□□ 0.96
NDNQ99608 AC091305.1-201ENST00000479476 895 ntBASIC21.05■□□□□ 0.96
NDNQ99608 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
NDNQ99608 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.05■□□□□ 0.96
NDNQ99608 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NDNQ99608 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NDNQ99608 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NDNQ99608 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDNQ99608 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDNQ99608 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDNQ99608 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDNQ99608 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDNQ99608 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
NDNQ99608 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NDNQ99608 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.04■□□□□ 0.96
NDNQ99608 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.04■□□□□ 0.96
NDNQ99608 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.04■□□□□ 0.96
NDNQ99608 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDNQ99608 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
NDNQ99608 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDNQ99608 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDNQ99608 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
NDNQ99608 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NDNQ99608 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NDNQ99608 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NDNQ99608 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDNQ99608 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NDNQ99608 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NDNQ99608 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDNQ99608 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDNQ99608 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.03■□□□□ 0.96
NDNQ99608 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
NDNQ99608 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDNQ99608 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.03■□□□□ 0.96
NDNQ99608 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.03■□□□□ 0.96
NDNQ99608 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.03■□□□□ 0.96
NDNQ99608 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.03■□□□□ 0.96
NDNQ99608 AL139246.5-201ENST00000606645 996 ntBASIC21.03■□□□□ 0.96
NDNQ99608 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDNQ99608 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NDNQ99608 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.02■□□□□ 0.96
NDNQ99608 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NDNQ99608 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NDNQ99608 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.02■□□□□ 0.96
NDNQ99608 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
NDNQ99608 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NDNQ99608 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.02■□□□□ 0.96
NDNQ99608 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.02■□□□□ 0.96
NDNQ99608 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms