Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.35■□□□□ 0.37
S1PR3Q99500 TSPY26P-201ENST00000476365 1326 ntBASIC17.35■□□□□ 0.37
S1PR3Q99500 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
S1PR3Q99500 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
S1PR3Q99500 AIRN-201ENST00000601203 4374 ntBASIC17.35■□□□□ 0.37
S1PR3Q99500 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.35■□□□□ 0.37
S1PR3Q99500 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
S1PR3Q99500 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
S1PR3Q99500 AP006587.3-201ENST00000525742 1516 ntBASIC17.35■□□□□ 0.37
S1PR3Q99500 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
S1PR3Q99500 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.35■□□□□ 0.37
S1PR3Q99500 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.35■□□□□ 0.37
S1PR3Q99500 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
S1PR3Q99500 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
S1PR3Q99500 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
S1PR3Q99500 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
S1PR3Q99500 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.34■□□□□ 0.37
S1PR3Q99500 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.34■□□□□ 0.37
S1PR3Q99500 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
S1PR3Q99500 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
S1PR3Q99500 AC009237.3-201ENST00000393279 1427 ntBASIC17.34■□□□□ 0.37
S1PR3Q99500 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
S1PR3Q99500 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.34■□□□□ 0.37
S1PR3Q99500 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
S1PR3Q99500 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.34■□□□□ 0.37
S1PR3Q99500 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
S1PR3Q99500 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
S1PR3Q99500 AC105233.4-201ENST00000642045 216 ntBASIC17.34■□□□□ 0.37
S1PR3Q99500 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
S1PR3Q99500 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
S1PR3Q99500 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
S1PR3Q99500 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
S1PR3Q99500 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.33■□□□□ 0.37
S1PR3Q99500 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
S1PR3Q99500 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
S1PR3Q99500 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
S1PR3Q99500 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
S1PR3Q99500 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
S1PR3Q99500 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
S1PR3Q99500 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.33■□□□□ 0.36
S1PR3Q99500 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.33■□□□□ 0.36
S1PR3Q99500 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
S1PR3Q99500 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.33■□□□□ 0.36
S1PR3Q99500 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
S1PR3Q99500 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
S1PR3Q99500 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
S1PR3Q99500 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
S1PR3Q99500 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.33■□□□□ 0.36
S1PR3Q99500 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
S1PR3Q99500 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
S1PR3Q99500 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.33■□□□□ 0.36
S1PR3Q99500 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.33■□□□□ 0.36
S1PR3Q99500 AC003102.1-202ENST00000563394 1796 ntBASIC17.33■□□□□ 0.36
S1PR3Q99500 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
S1PR3Q99500 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
S1PR3Q99500 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
S1PR3Q99500 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
S1PR3Q99500 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.32■□□□□ 0.36
S1PR3Q99500 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.32■□□□□ 0.36
S1PR3Q99500 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.32■□□□□ 0.36
S1PR3Q99500 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.32■□□□□ 0.36
S1PR3Q99500 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.32■□□□□ 0.36
S1PR3Q99500 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
S1PR3Q99500 FEM1AP4-201ENST00000443167 1987 ntBASIC17.32■□□□□ 0.36
S1PR3Q99500 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
S1PR3Q99500 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
S1PR3Q99500 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
S1PR3Q99500 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
S1PR3Q99500 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
S1PR3Q99500 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
S1PR3Q99500 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
S1PR3Q99500 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
S1PR3Q99500 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
S1PR3Q99500 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
S1PR3Q99500 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
S1PR3Q99500 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
S1PR3Q99500 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
S1PR3Q99500 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
S1PR3Q99500 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
S1PR3Q99500 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
S1PR3Q99500 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.31■□□□□ 0.36
S1PR3Q99500 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
S1PR3Q99500 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.31■□□□□ 0.36
S1PR3Q99500 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.31■□□□□ 0.36
S1PR3Q99500 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.31■□□□□ 0.36
S1PR3Q99500 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.31■□□□□ 0.36
S1PR3Q99500 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.31■□□□□ 0.36
S1PR3Q99500 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
S1PR3Q99500 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
S1PR3Q99500 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
S1PR3Q99500 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
S1PR3Q99500 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
S1PR3Q99500 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
S1PR3Q99500 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
S1PR3Q99500 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.3■□□□□ 0.36
S1PR3Q99500 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
S1PR3Q99500 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
S1PR3Q99500 AC105265.2-201ENST00000467189 838 ntBASIC17.3■□□□□ 0.36
S1PR3Q99500 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.3■□□□□ 0.36
S1PR3Q99500 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms