Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CCDC85AQ96PX6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.28■■□□□ 1.8
CCDC85AQ96PX6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC85AQ96PX6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC85AQ96PX6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC26.27■■□□□ 1.8
CCDC85AQ96PX6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC85AQ96PX6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC85AQ96PX6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC26.27■■□□□ 1.8
CCDC85AQ96PX6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC85AQ96PX6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC26.27■■□□□ 1.8
CCDC85AQ96PX6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.27■■□□□ 1.8
CCDC85AQ96PX6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC26.27■■□□□ 1.8
CCDC85AQ96PX6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC26.26■■□□□ 1.79
CCDC85AQ96PX6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC85AQ96PX6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC85AQ96PX6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC26.26■■□□□ 1.79
CCDC85AQ96PX6 POU5F1P4-201ENST00000413175 1085 ntBASIC26.26■■□□□ 1.79
CCDC85AQ96PX6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC85AQ96PX6 AC069152.1-201ENST00000438030 544 ntBASIC26.26■■□□□ 1.79
CCDC85AQ96PX6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC26.26■■□□□ 1.79
CCDC85AQ96PX6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC85AQ96PX6 MIR4651-201ENST00000582622 73 ntBASIC26.26■■□□□ 1.79
CCDC85AQ96PX6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC85AQ96PX6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
CCDC85AQ96PX6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC85AQ96PX6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC85AQ96PX6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
CCDC85AQ96PX6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC85AQ96PX6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC85AQ96PX6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC85AQ96PX6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC85AQ96PX6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.25■■□□□ 1.79
CCDC85AQ96PX6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC26.25■■□□□ 1.79
CCDC85AQ96PX6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC85AQ96PX6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC85AQ96PX6 MARS-234ENST00000630571 216 ntTSL 5 BASIC26.25■■□□□ 1.79
CCDC85AQ96PX6 MARS-235ENST00000630803 183 ntTSL 3 BASIC26.25■■□□□ 1.79
CCDC85AQ96PX6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC85AQ96PX6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.25■■□□□ 1.79
CCDC85AQ96PX6 MKRN4P-201ENST00000444706 1521 ntBASIC26.24■■□□□ 1.79
CCDC85AQ96PX6 FAM99A-202ENST00000538190 1989 ntBASIC26.24■■□□□ 1.79
CCDC85AQ96PX6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC85AQ96PX6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC26.24■■□□□ 1.79
CCDC85AQ96PX6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC85AQ96PX6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC85AQ96PX6 AC007322.4-201ENST00000509611 723 ntBASIC26.24■■□□□ 1.79
CCDC85AQ96PX6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.24■■□□□ 1.79
CCDC85AQ96PX6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.24■■□□□ 1.79
CCDC85AQ96PX6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC85AQ96PX6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.24■■□□□ 1.79
CCDC85AQ96PX6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC85AQ96PX6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC85AQ96PX6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC85AQ96PX6 RBM17P2-201ENST00000616397 1405 ntBASIC26.23■■□□□ 1.79
CCDC85AQ96PX6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC26.23■■□□□ 1.79
CCDC85AQ96PX6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC85AQ96PX6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
CCDC85AQ96PX6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.23■■□□□ 1.79
CCDC85AQ96PX6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC85AQ96PX6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC85AQ96PX6 MIPEPP3-201ENST00000412105 444 ntBASIC26.23■■□□□ 1.79
CCDC85AQ96PX6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC26.23■■□□□ 1.79
CCDC85AQ96PX6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
CCDC85AQ96PX6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.23■■□□□ 1.79
CCDC85AQ96PX6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.22■■□□□ 1.79
CCDC85AQ96PX6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CCDC85AQ96PX6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC85AQ96PX6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC85AQ96PX6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC85AQ96PX6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC26.22■■□□□ 1.79
CCDC85AQ96PX6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC85AQ96PX6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
CCDC85AQ96PX6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC26.21■■□□□ 1.79
CCDC85AQ96PX6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.21■■□□□ 1.79
CCDC85AQ96PX6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC85AQ96PX6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC85AQ96PX6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC85AQ96PX6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC85AQ96PX6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC26.21■■□□□ 1.79
CCDC85AQ96PX6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC85AQ96PX6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC26.21■■□□□ 1.79
CCDC85AQ96PX6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC26.21■■□□□ 1.79
CCDC85AQ96PX6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
CCDC85AQ96PX6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC85AQ96PX6 KRT16P2-201ENST00000414673 1423 ntBASIC26.21■■□□□ 1.79
CCDC85AQ96PX6 C11orf96-202ENST00000528572 1834 ntBASIC26.21■■□□□ 1.79
CCDC85AQ96PX6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.79
CCDC85AQ96PX6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
CCDC85AQ96PX6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC26.2■■□□□ 1.78
CCDC85AQ96PX6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CCDC85AQ96PX6 AC133041.1-202ENST00000642053 222 ntBASIC26.2■■□□□ 1.78
CCDC85AQ96PX6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.19■■□□□ 1.78
CCDC85AQ96PX6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC85AQ96PX6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CCDC85AQ96PX6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC85AQ96PX6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC26.19■■□□□ 1.78
CCDC85AQ96PX6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC26.19■■□□□ 1.78
CCDC85AQ96PX6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
CCDC85AQ96PX6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC26.19■■□□□ 1.78
CCDC85AQ96PX6 AC008694.1-202ENST00000636953 945 ntBASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms