Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
AP1S3Q96PC3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 FP325331.1-202ENST00000623531 1380 ntBASIC15.88■□□□□ 0.13
AP1S3Q96PC3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 NTF6A-201ENST00000591175 560 ntBASIC15.88■□□□□ 0.13
AP1S3Q96PC3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP1S3Q96PC3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S3Q96PC3 FAM99A-202ENST00000538190 1989 ntBASIC15.87■□□□□ 0.13
AP1S3Q96PC3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S3Q96PC3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.87■□□□□ 0.13
AP1S3Q96PC3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.87■□□□□ 0.13
AP1S3Q96PC3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S3Q96PC3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S3Q96PC3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC15.87■□□□□ 0.13
AP1S3Q96PC3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S3Q96PC3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S3Q96PC3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S3Q96PC3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S3Q96PC3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S3Q96PC3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
AP1S3Q96PC3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
AP1S3Q96PC3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP1S3Q96PC3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 AC010542.4-201ENST00000563151 1910 ntBASIC15.86■□□□□ 0.13
AP1S3Q96PC3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 AC005703.6-201ENST00000623265 1329 ntBASIC15.86■□□□□ 0.13
AP1S3Q96PC3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
AP1S3Q96PC3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP1S3Q96PC3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP1S3Q96PC3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP1S3Q96PC3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
AP1S3Q96PC3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
AP1S3Q96PC3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP1S3Q96PC3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP1S3Q96PC3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC15.85■□□□□ 0.13
AP1S3Q96PC3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC15.85■□□□□ 0.13
AP1S3Q96PC3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC15.85■□□□□ 0.13
AP1S3Q96PC3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP1S3Q96PC3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP1S3Q96PC3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.85■□□□□ 0.13
AP1S3Q96PC3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP1S3Q96PC3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP1S3Q96PC3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
AP1S3Q96PC3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.85■□□□□ 0.13
AP1S3Q96PC3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP1S3Q96PC3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15.85■□□□□ 0.13
AP1S3Q96PC3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
AP1S3Q96PC3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms